Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0667 ATGAAGAATTTCTTGGTTTCTTTATTTTATTTGTTTCCTCCTATCATTGCAATCATTCTGTTGCTGCTTACTCCAATTCCAAATGCACAATTAACATCAAGTGAGAATAGAATTCTTCTCCAAATTCAAAAGCTTCTTGAATATCCTCAAGTTCTTGAAGGATGGACTAACATGACAAATTTCTGCTACCTCCCTCCCTCACTTTCTCTCAAGATTGTGTGCTCAAATGGTCATGTAATTGAGTTAACTATCATTGGAAACAAGGGCTCCCCATTTTCTCGAAGAACAGAACAAACTTTTCGGAATTTGAATGAAACTCTTTCGAAAAGATTCTCCATTCATTCTTTCTTTACTGTCTTGACAAAGCTTTCAAACTTGAAGGTGTTGTCATTGGTGTCCATTGGCCTTTGGGGTCATTTACCATCGAAGATTAACCGGTTCGCATCGCTGGAAGTTATGAACATTAGCTCAAATTTCATCAATGGTGAAATACCATCATCAATATCCTCTATGAAAAGTCTCAAGAGTCTAGTTTTGGCTGATAATCAGTTCAATGGGATTGTCCTTGATCTTACAGGACTTGCTTCACTCGAAGAGCTGAACTTGAGTGGCAACAAATTCGGTCCTGAATTCCCTTCAACTGCGAAGAAGCTTATGAGGATCAACTTGAGAAACAATTCTCTTAGATGTCAGATTCCACCCCAACTAATGCAGGTTGATAAACTTCAACAACTTGACATTTCTTCCAACGAAGTATTCGGAAATATCCCATCTTTTCTGTTCTCTCTTCCTTTCCTCCAGTACCTAAACTTGGCTGCAAATCATCTAAGTGGTTCTCTCTCTTTGAACATATCATGTAGTTCTGCTCTAACATTTGTAGATATATCAAACAACTTCCTGCTAGGAAAATTGCCACCCTGCATTGGTTCAAAGTCATCGAAACGAACAGTACTGTATTCAGGAAATTGTTTGTCAGCGAGACGCTCAAATGATCAGTTTCCATCTTCATATTGCAAGAAAGGAGCAGCCTTAGCGGTTAAGCCGCCACTTGGAAGCCAGAAGGATGAGTCAAAGATGCAACTAGGCCTAGTACTTGGTATTACCGGAGGTGCTGTAGGAATTACAGTATTCCTGGCTTCACTCATCTTGTTCATCTTTAGAAAGTCCAGATCAGAAAGAACAGATAATAACGTAGACAGACATGTTTCGGATAAAGTCTCAATCACTGCATATCCAAGACCAAATGTTGAGACAGGACATGTTCCTCAGACAATACTTGAATTCCCACCATACAGCATTTTCACATCAGAAGAAATTGAAGATGCAACAAACAACTTTCACCCATCAAACTTAATAGAAGGATCTCAAGGAAAGCTATATAAAGCTTGGCTTAGAGATGGTTCAATGGTACTGGTTCATCGCGTAAAGCTAAAGCAGCCTTTGCTAAAAAATATTATGCAGAACTTGAAGGTATTATCCAATTTAAGGCATAGGCATTTGGTGAGTATTGTAGGACACTGCGTCGTTACTTATCAGGGCCATCCCCAAACAGCAAGCACAATATTCATAGTATTTGAACACGTTTCAAATGTGTCGTTGAAGGATCATCTAACAAATAGGAGAAAAAAGGAATTGCTGAAATGGCCACAAAGAATGACAATCAGCATAGGCATTGCAAGAGGAATCCAGTTCTTGCACAAAGGAATTGCTCCCGGAATATTCGGCAATAATTTGAAGATTGAGAACATTCTTTTAGATGGTAGTCTCAATGCAAAAGTTAGTGGATACAGTATTCCATTGCCATCAAAGCTGGAGAAAGGCTTATTAGAGGCTACATCACCGATGCTAATGAGTGCGACCGATCCTAACATTGAGGGAACTTATGCATATGAATCAATGAAGACTGCAGTTCAGATTACCATAAACTGTATCAGCAAGAATTCCAGTAATCACCCATCAATAGAGGATATTATCTGGAATTTGCAGTACTCGATGCAAGCTCAAGGGTCAAGGACCAGCAGTGGAAACCCCAGTCCAAACCTGTAA 2046 0.393 MKNFLVSLFYLFPPIIAIILLLLTPIPNAQLTSSENRILLQIQKLLEYPQVLEGWTNMTNFCYLPPSLSLKIVCSNGHVIELTIIGNKGSPFSRRTEQTFRNLNETLSKRFSIHSFFTVLTKLSNLKVLSLVSIGLWGHLPSKINRFASLEVMNISSNFINGEIPSSISSMKSLKSLVLADNQFNGIVLDLTGLASLEELNLSGNKFGPEFPSTAKKLMRINLRNNSLRCQIPPQLMQVDKLQQLDISSNEVFGNIPSFLFSLPFLQYLNLAANHLSGSLSLNISCSSALTFVDISNNFLLGKLPPCIGSKSSKRTVLYSGNCLSARRSNDQFPSSYCKKGAALAVKPPLGSQKDESKMQLGLVLGITGGAVGITVFLASLILFIFRKSRSERTDNNVDRHVSDKVSITAYPRPNVETGHVPQTILEFPPYSIFTSEEIEDATNNFHPSNLIEGSQGKLYKAWLRDGSMVLVHRVKLKQPLLKNIMQNLKVLSNLRHRHLVSIVGHCVVTYQGHPQTASTIFIVFEHVSNVSLKDHLTNRRKKELLKWPQRMTISIGIARGIQFLHKGIAPGIFGNNLKIENILLDGSLNAKVSGYSIPLPSKLEKGLLEATSPMLMSATDPNIEGTYAYESMKTAVQITINCISKNSSNHPSIEDIIWNLQYSMQAQGSRTSSGNPSPNL* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0667 681 Pfam Leucine rich repeat 149 207 IPR001611 GO:0005515
Lan2g0667 681 Gene3D Transferase(Phosphotransferase) domain 1 528 606 - -
Lan2g0667 681 Pfam Leucine Rich Repeat 290 309 IPR001611 GO:0005515
Lan2g0667 681 SUPERFAMILY Protein kinase-like (PK-like) 424 596 IPR011009 -
Lan2g0667 681 Pfam Protein tyrosine and serine/threonine kinase 451 597 IPR001245 GO:0004672|GO:0006468
Lan2g0667 681 Gene3D Ribonuclease Inhibitor 217 346 IPR032675 -
Lan2g0667 681 Gene3D Ribonuclease Inhibitor 32 216 IPR032675 -
Lan2g0667 681 ProSiteProfiles Protein kinase domain profile. 445 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0667 681 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 3 604 - -
Lan2g0667 681 PANTHER RECEPTOR-LIKE KINASE FAMILY PROTEIN, PUTATIVE-RELATED 608 673 - -
Lan2g0667 681 Gene3D Phosphorylase Kinase; domain 1 415 513 - -
Lan2g0667 681 PANTHER OS07G0166700 PROTEIN 608 673 IPR045272 GO:0004714|GO:0006468
Lan2g0667 681 PANTHER OS07G0166700 PROTEIN 3 604 IPR045272 GO:0004714|GO:0006468
Lan2g0667 681 SUPERFAMILY L domain-like 38 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0667 Lan-Chr2 12214373 12217557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0667 29 630 Miscellaneous Gene Families AT2G02780 48.889 1.18e-171 505
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lan2g0667 PK_Tyr_Ser-Thr 2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0667 - - gmx:100803061 800.431