Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0641 ATGGCGGAACGTCGTCCTTCTAAGCGCTCCAAAATCACGAGGGGGGAAGATGATTATATGCCTGGAAACATTCTTGAGATTGAGCTTGATAAGTTCATGACCTTTGGGCACCTAAAATGCAAACCAGGGCCTCGATTGAATCTTGTTGTTGGACCCAATGGGTCTGGAAAGAGTTCTCTTGTATGTGCTATTGCTCTTGGCCTCTGTGGAGAGCCCCAGTCACTCGGGCGAGCAACGAGTATTGGGTCATACGTGAAGAACGGAGAAGAGTCTGGCTACATTACAATTACATTGAGAGGGGACCATAAAGAGGAACGTATTACCATTACACGTAAAATTAATAAAAACAACAAGTCTGAATGGTTGTTAAATGGAAATGTAGTGCCCAAAAAAGATGTTGCTGAAACCATTCAAAGGTTTAACATCCAAGTTAATAATTTGACTCAATTTTTACCACAAGACAGGGTCTGTGAGTTTGCAAAGTTAACTCCCGTGCAACTTTTGAAAGAAACCGAAAAGGCTGTTGGTGATGCACAGCTTCCAGAGCAACATCATGCACTAGTTGAGAAAAGTTGTGCATTGAAGCAGATTGAGCTGTCTTTGGAGAAAAATGAAGAACGTTTAAAGCAGATGAAGGAGCTCAATGATGAACTTCTTGCCAAGGCTGAAACCATGAAGAAGAAATTGCCATGGCTTAAGTACGATATGAAGCAATCTGAGTATCTGGAAGCCAAGGAGCGCCAGAAAGATGCAGAAAATGCATTGAAGGAGGCTGCAAAGATATTAAGTGATCTTCAAGAACCTATTAAGAAACAGAAAAAAGAGAGGGATGCATTAGATGCAAAATGTCGAAAAGTTATGAGCTGCATAGCTGAGAATGCCAGGAAGCGAACAGAACACGTGGAAAAAGAGAATCTTTTGGAGGTTGAATTACAAGGAAAGTACAAAAACATGGAAGAATTAAGGAGAGGGGTAGAAAGTCGACAAGAAAGACTTCATAAAGCTAGGGAGGAACTTGCTGCTGCTGAACTTGAACTTGAGAATGTGCGACCTTATGAAGCTTTTCAGGATGAACTTAAAAGACTAAAAGATGAATATTTGGAGTTGGATTCTTCTGCAAGACAAGTGAGGCAGAGTAAGTCCCAAGTGGAAAACGAAATGAGGCATAAGAGGTCATCCTTGATGCAGTGTAAAGAGAGGTTGAGAGATATGAATAATAAAAATACGAAGTGTTTGCATTTACTGCAAAAATCTGGGGCTGAAAATATTTTCGAAGCTTATAAATGGGTCCAAGAACATCGCAGTGATTTCAATAAGGAGGTTTATGGCCCGGTCCTTGTTGAGGTGAATGTCTCAAGTCAGCTTCATGCTGCATTTCTAGAGGGTCAAGTTGCTAATTACATTTGGAAGTCTTTCATAACCCAAGATTCTAGTGACCGGGACCTTCTGGTGAAACATCTGAAGCCGTTTGGTGTCCCAGTTTTAAATTATACTGGTGTTGATGGCCAGCAAAGAGAGCCTTTTGAAATTTCTGAAGATATGCATGCGCTGGGCATCTACTCCCGATTGGACCAAATATTTGATGCTCCTGGTGCTGTCAAGGAAGTTATGATTGAGCAGTTTATTCTAGATCATTCATATATTGGATCAAAAGAAACTGATCAGAAGGCTGCCGAGGTCCCAAAATTGGGAATTTCTAATTTATGGACACCAGAAAATCACTACCATTGGTCTAAGTCTAGATATGGTAATCATATCTCAGCAGTCGTTGATCAAGTTGGACGCCCACAACTTTTATTGACCAATTTGGATGTGGGAGAAATTGAGAAGCTGAGTTCCCAAGAAAGAGAGCTTGAAGAATCTATAGCAACTTTGGAGGAAAATGTTAAAAGGTTTCAAGAAAAGGAAAGAAGCTTACTGAATCAAGCAGCTAGTCGTCGTAAACAGTGGGAGGATATAAGCATTACAGCAAAGAATGAGAAAAGCAAACGTAAAGCGATCACTGAACGTATTGCACAGAAGAGATTGTTATTGGAATCGAAGGAGAAGGAGGATAATATTGATACTCTGATGGCTAAGCTTTTTGATCAAGCTTCAAACTATAAAATTGAACGATTCCATAATGCAATGAAAATTAAGGATCTTCTTGTTGAAGCTGTGGGTTACAAAAAGTGTCTTCTTGAACAACGTATGACTTTCTTTGAGCTGGATGCTAAGATTGGAGAACTGGAGGCCAATTTGAAGCAGTATGAGAATGTTGCTGTGCAAACTTCAACTCACTTTAATAACTGTAAGAAAGAGGCTGAGAATTTTCAACAGCAGCTTACAGATTACTTGAAGCATGCGAAATCAATTGCTAGGCTCACACCTGAGTTGGAGAAGGAATTTCTTGAGATGCCTACTACAATTGAGGAATTGGAAGCAGCTATCCAAGATACCATTTCTCAAGCCAATTCAATCCTTTTTGTCAATCCCAACATATTAGAACAATATGAGCATCGTCAACGGCAGATTGGAGATCTTGCAGCAAAACTTGAAGCCAACAAGAAGGAATCTATGAAGTGTTTAGCTGAACTAAATGACATCAAGGGAAAATGGCTGCCAAAACTGAGAAACCTCGTGGCTCAGATAAATGAAACTTTTAGCCATAATTTTCAGGAAATGGCTGTTGCTGGAGAGGTTTCACTAGATGAACATGATATGGACTTTGATCAATTTGGAATACTTATAAAAGTCAAATTCAGAGAAACCGGACAGCTTCAAAATCTGAGTGCCCATCATCAATCTGGAGGGGAGCGATCAGTTTCAACCATTGTTTATCTTGTTTCTCTTCAAGATCTTACAAACTGCCCATTTAGAGTTGTTGATGAGATAAATCAAGGGATGGACCCAATAAATGAAAGGAAGATGTTCCAGCAACTGGTGAGAGCTGCAAGCAAACCAAATACACCACAGTGTTTCTTGCTCACCCCAAAGTTGCTACCTGATCTACAATATAGTGACGCTTGCAGTATATTGAATGTAATGACTGGTCCTTGGATTGAGCAAACATCAAAGGTCTGGACTAATGGTGATCGATGGGGTATTATCACTGGACTTGTACAATAG 3108 0.4012 MAERRPSKRSKITRGEDDYMPGNILEIELDKFMTFGHLKCKPGPRLNLVVGPNGSGKSSLVCAIALGLCGEPQSLGRATSIGSYVKNGEESGYITITLRGDHKEERITITRKINKNNKSEWLLNGNVVPKKDVAETIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLKETEKAVGDAQLPEQHHALVEKSCALKQIELSLEKNEERLKQMKELNDELLAKAETMKKKLPWLKYDMKQSEYLEAKERQKDAENALKEAAKILSDLQEPIKKQKKERDALDAKCRKVMSCIAENARKRTEHVEKENLLEVELQGKYKNMEELRRGVESRQERLHKAREELAAAELELENVRPYEAFQDELKRLKDEYLELDSSARQVRQSKSQVENEMRHKRSSLMQCKERLRDMNNKNTKCLHLLQKSGAENIFEAYKWVQEHRSDFNKEVYGPVLVEVNVSSQLHAAFLEGQVANYIWKSFITQDSSDRDLLVKHLKPFGVPVLNYTGVDGQQREPFEISEDMHALGIYSRLDQIFDAPGAVKEVMIEQFILDHSYIGSKETDQKAAEVPKLGISNLWTPENHYHWSKSRYGNHISAVVDQVGRPQLLLTNLDVGEIEKLSSQERELEESIATLEENVKRFQEKERSLLNQAASRRKQWEDISITAKNEKSKRKAITERIAQKRLLLESKEKEDNIDTLMAKLFDQASNYKIERFHNAMKIKDLLVEAVGYKKCLLEQRMTFFELDAKIGELEANLKQYENVAVQTSTHFNNCKKEAENFQQQLTDYLKHAKSIARLTPELEKEFLEMPTTIEELEAAIQDTISQANSILFVNPNILEQYEHRQRQIGDLAAKLEANKKESMKCLAELNDIKGKWLPKLRNLVAQINETFSHNFQEMAVAGEVSLDEHDMDFDQFGILIKVKFRETGQLQNLSAHHQSGGERSVSTIVYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASKPNTPQCFLLTPKLLPDLQYSDACSILNVMTGPWIEQTSKVWTNGDRWGIITGLVQ* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0641 1035 Coils Coil 318 345 - -
Lan2g0641 1035 Gene3D - 834 1004 IPR027417 -
Lan2g0641 1035 Coils Coil 733 753 - -
Lan2g0641 1035 Coils Coil 828 848 - -
Lan2g0641 1035 CDD ABC_SMC5_euk 22 168 - -
Lan2g0641 1035 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 18 1033 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Lan2g0641 1035 Coils Coil 234 261 - -
Lan2g0641 1035 Coils Coil 664 684 - -
Lan2g0641 1035 Coils Coil 352 379 - -
Lan2g0641 1035 CDD ABC_SMC5_euk 912 1014 - -
Lan2g0641 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 300 IPR027417 -
Lan2g0641 1035 Gene3D - 23 293 IPR027417 -
Lan2g0641 1035 Coils Coil 194 228 - -
Lan2g0641 1035 Coils Coil 608 642 - -
Lan2g0641 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 765 990 IPR027417 -
Lan2g0641 1035 Pfam RecF/RecN/SMC N terminal domain 24 980 IPR003395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0641 Lan-Chr2 11458883 11490874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0641 1 1028 Structural Maintenance of Chromosomes family AT5G15920 60.999 0.0 1254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0641 K22803 - gmx:100778678 1575.45