Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0635 ATGGGCAAAGCAAGTTATTGGGCTATTCAATCCTTTCTTATTTTCTCATTCTTTGTGGCTGGAATTCATGGAAATAAACAAACTCAAGCTCTTCAAAAGTTGTACAAGTTAAAATACAAAGCAAATTCACAAATTGATAGGAGTTACTTTAAAGCACAAGAGCTTGTGGGTGATCTCATTATTGATTCTAATAAGGGTCTTAAAGAGAAAGACAAGATTGATAAGCTTCCAGGGCAGCCACCTGTGAATTTCTCTCAATATGGAGGGTATGTCACAGTGGATAAATCGGTAGGGCGTGCATTTTACTATTACTTTGTGGAATCTCAACATTCCAAAAAAACAAAGCCTCTTCTTCTTTGGCTAAATGGAGGTCCTGGATGTTCATCTCTTGGCTATGGAGCAATGGAAGAAATTGGACCCTTCAGAGTAAACAGTGATAGGAAAACACTTAACCAAAATATATATTCATGGAACAATGCTGCAAATATATTGTTCCTTGAGTCACCTGCTGGGACAGGATTTTCTTACTCAAATAAATCATCGGAATATGAAACAAGTGGGGATAGGAAAACAGCAATAGATAACTATGTGTTCTTAGTGAATTGGTTGGAGAGATTTCCCGAGTATAAGAAAAGAGATTTCTACATAGTTGGAGAGAGCTATGCTGGGCATTTTGTTCCTCAACTTGCCCAAACTATTCTCCAACAGAACAAAAAGGCTAATCATACAATCATCAACCTCAAAGGAATAATGATTGGGAATCCAGTGATTCATGATGAAAGAGACAATAAAGGAACGTATGATTTTCTTGCTAGCCATGCAATCATCTCAGACCAAACAGCATATGATTTCAACAAATTTTGTAATAATTCATCTGATCCCAAAAATATACCAATTCAGTGCGACAAAGCACAAGACGAATTTAGCAAGGACACAGACGACATTGATCTCTCTAATATCTATGCTCCAAATTGCAAAAATGATGATGATCCCAACCTCACTGCCACAACCAAGATGAACTCTATTGTTAATGATCCGTGTAGTGATGATTACGTCCATACATATCTTAACCGAGGTGATGTTCAGGAGGCCTTACATGCAAACGTCACCAAGCTCAAATATACTTGGGAGCTTTGCAGTTCCATACTTTTGTGGGTTGATAGCTCTCCAACAATCATTCCCCTTTTGCATGAATTCCTCAATAATAGACTCAGGGTTTGGATTTTTAGTGGTGATGTAGATGGAATTGTGCCTATCACTTCAACCAAGTATTCCATTAAGGAGATGAATCTCTCCACTAAAACTGCTTGGCATCCTTGGTTTATTGATCGAGAGGTAGGTGGCTACACTCAGGTGTACAAGGGAGATCTAACTTTTGCCACAGTAAGAGGAGCTGGACATCAAGTACCTATTTCCCAGCCAAGAAGAGCATTTTCTTTGATCCAACACTTCTTAAATGGAACTCAACTTCAAACTACTAAATGA 1485 0.3818 MGKASYWAIQSFLIFSFFVAGIHGNKQTQALQKLYKLKYKANSQIDRSYFKAQELVGDLIIDSNKGLKEKDKIDKLPGQPPVNFSQYGGYVTVDKSVGRAFYYYFVESQHSKKTKPLLLWLNGGPGCSSLGYGAMEEIGPFRVNSDRKTLNQNIYSWNNAANILFLESPAGTGFSYSNKSSEYETSGDRKTAIDNYVFLVNWLERFPEYKKRDFYIVGESYAGHFVPQLAQTILQQNKKANHTIINLKGIMIGNPVIHDERDNKGTYDFLASHAIISDQTAYDFNKFCNNSSDPKNIPIQCDKAQDEFSKDTDDIDLSNIYAPNCKNDDDPNLTATTKMNSIVNDPCSDDYVHTYLNRGDVQEALHANVTKLKYTWELCSSILLWVDSSPTIIPLLHEFLNNRLRVWIFSGDVDGIVPITSTKYSIKEMNLSTKTAWHPWFIDREVGGYTQVYKGDLTFATVRGAGHQVPISQPRRAFSLIQHFLNGTQLQTTK* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0635 494 Pfam Serine carboxypeptidase 77 487 IPR001563 GO:0004185|GO:0006508
Lan2g0635 494 Gene3D - 347 383 - -
Lan2g0635 494 Gene3D alpha/beta hydrolase 67 327 IPR029058 -
Lan2g0635 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 153 165 IPR001563 GO:0004185|GO:0006508
Lan2g0635 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 176 IPR001563 GO:0004185|GO:0006508
Lan2g0635 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 202 227 IPR001563 GO:0004185|GO:0006508
Lan2g0635 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 457 470 IPR001563 GO:0004185|GO:0006508
Lan2g0635 494 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 491 IPR001563 GO:0004185|GO:0006508
Lan2g0635 494 SUPERFAMILY alpha/beta-Hydrolases 75 489 IPR029058 -
Lan2g0635 494 Gene3D - 392 487 - -
Lan2g0635 494 PANTHER CARBOXYPEPTIDASE 12 491 - -
Lan2g0635 494 ProSitePatterns Serine carboxypeptidases, histidine active site. 457 474 IPR033124 GO:0004185
Lan2g0635 494 ProSitePatterns Serine carboxypeptidases, serine active site. 216 223 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0635 Lan-Chr2 11220899 11228532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0635 355 490 Calmodulin-binding Proteins AT2G22960 30.882 1.02e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0635 K16297 - gmx:100783864 668.307