Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0628 ATGAAAATCCCTTGTTGTTCGGTGTGCCAAACGCGGTATAACGAAGAAGAGCGAGTTCCGCTTCTTCTACAATGCGGTCACGTTTTCTGCAGAGAATGTCTTTCTAGAATGTTCTCTGCTTCTTCTGACGCAACGCTTACGTGTCCGCGGTGCCGCCACGTGTCCACCATCGGGAACTCCGTTCAGGCACTTCGCAAGAACTTCGCCGTTCTCGCGCTCATCCACTCCGCCGCCAATGCCGCGAATTTGGACTGTGACTACACTGACGATGATGACGCGAGCGGCGAGGTGGAGGATGATGAGGAGAAGCGGCGGCGGCTGTGCGGGTCGCAGACATCCAGTTCGGGAGGTTGCGAGCAGGTGATCGAGGTCGGGGCGCATCAGGAGATGAAACTGGTCGAGCGGATTGGAGAGGGGAGGAGGGCTGGAGTGGAGATGTGGACTGCGGTGATTGGTGGAAGTGTCGGCCGGCGACATCGTGTGGCGGTTAAAAAGGTGATGGTAGTGGAGGGGATGGATTTGGAATGGGTGCAGGGGAAGTTGGAGAATCTGCGTAGGGCTTCAATGTGGTGTAGGAATGTGTGCACTTTTCATGGAGCAATGAAAGTGGAAGAGAGTTTGTGCCTTGTGATGGATAGGTGCTATGGATCAGTTCAGTCTGAGATGCAGCGGAATGAAGGGAGACTCACCTTGGAGCAAGTCCTAAGATATGGGGCAGACATTGCACGCGGGGTTCTTGAGCTTCATGCTGCAGGTGTTGTTTGCATGAATTTAAAACCTTCCAATCTTCTTCTCAATGCAAATGGTCATGCGGTGGTTTCTGATTATGGACTTGCTACAATTCTGAAGAAGCCTTCCTGTTGGAAGGCTCGACCAGAGTGTGACTCCTCAAAGATCCATTCCTGTATGGAATGTATAATGCTTAGTCCACATTATACAGCACCCGAGGCTTGGGAGCCTGTGAAGAAGTCTTTAAATTTGTTCTGGGATGATGCAATAGGTATATCTTCTGAGTCGGACGCTTGGAGTTTTGGCTGTACATTGGTGGAGATGTGCACGGGTTCCATTCCTTGGGCTGGTTTAAGTACAGAGGAAATTTATCGAGCAGTTGTTAAGGCAAAGAAATTGCCTCCACAGTATGCTAGTGTGGTTGGTGGTGGAATTCCGAGAGAATTGTGGAAGATGATTGGAGAGTGCTTGCAGTTCAAGCCATCTAAAAGGCCTACTTTTAATGCAATGTTAGCAATATTTCTCCGTCATTTGCAAGAAATACCACACAGTCCTCCTCCAAGCCCTGATAATGACTTCGCTAAAGGTTCTGTGTCAAATGTGACCGAACCTTCCCAAGTACCTGAATTAGATGTTCCTCAGGAAAATCCAAATCATCTTCATCGACTTGTGTCTGAAGGGGATGCCACAGGTGTTAGAGATCTTCTTGCAAAGGTGGCATTAGAAAATGGTAACAACTACATATCTTCTGTATTGGAAACCCAAAACGCTGATGGTCAAACGGCTCTCCACTTAGCTTGTAGGCGTGGTAGTGCAGAACTTGTTGAGGCAATTTTGGAGTATGAAGAGGCCAATGTTGATGTCTTGGACAAAGATGGAGATCCTCCTCTTGTTTTTGCACTGGCAGCTGGGTCCCCGGAATGTGTTCATAGCCTTATCACGCGAAATGCTAATGTGAGGTCACGATTGAGAGATGGCTTGGGCCCATCTGTGGCTCATGTTTGTGCCTATCATGGCCAACCGGATTGTATGCGAGAATTACTATTAGCTGGAGCTGATCCTAATGCAGTGGATGATGAAGGTGAATCTGTACTGCATAGGGCAATTTCCAAGAAGTACACAGACTGTGCTCTCATGATTTTGGAAAATGGGGGCTGTAGATCAATGGCCATCTTGAATTCAAAGAATTTGACACCACTGCATTTGTGCGTGGCAACATGGAATGTCACGGTTGTGAAGAGATGGGTGGAAATTGCAACTTCTGATGATATTACCGAAGCAATTGACATACCTAGCTCCATCGGCACTGCCTTGTGCATGGCAGCTGCATCTAAGAAAGACCATGAAAGTGAGGGTAGAGAACTGGTGTGGATATTGCTTGCAGCAGGAGCAGATCCGTCTGCTCAAGATTCACAGAATGGGAGGACAGTTTTGCACACAGCTGCTATGACTAATGATGTGGACTTGGTTAAGGTTATTCTTGCTGCTGGTGTTGATGTGAATATTCGCAATGTGCATAACAGTATACCTCTTCACTTATCCCTAGATCGGGGTGCGAAGGCATGTGTTGGACTACTTCTAGCTGCTGGGGCAGATTGTAATTTGCAGAATGATGATGGTGACACTGCCTTCCATATAGCAGCAGAGACAGCAAAAATGATACGTGAAAATCTTGATTGGCTTACTGTTATGCTAAGGATTCCGAATGCTGATATTGAAGTCAGAAACCACAGTGGCAAGACCCTTCGTGACATCTTGGAGGCCCTCCCCCGAGAATGGATATCAGAAGATCTGATGGAGGCACTCATGAGTAGAGGAGTTTGTTTGTCTCCTACTATATTTGAAGTGGGAGATTGGGTGAAGTTTAGAAGAACTGTCATAACTCCAACCAATGGGTGGCAAGGTGCTAGACAGAAGAGTGTTGGCTTTGTGCAAAGTGTTCCAGACAGAGATAATATTGTTGTTTCATTTTGTTCTGGAGAGGTTCATGTTCTGGCAAATGAAGTTGTAAAAGTCATTCCATTAGACAGGGGACAACATGTACAGCTAAAAGAAGATGTAAAAAAGCCCAGGTTTGGTTGGCGTGAGCAGGCACGTGATAGCATTGGGACAGTATTATGTGTTGATGATGATGGTATCCTCCGTGTTGGGTTTCCTGGAGCATCTAGAGGATGGAAAGCTGACCCAGCTGAGATGGAACGGGTTGAGGAATTCAAGGTTGGAGACTGGGTTCGTATCCGTCCGAATTTAACTTCTGCTAAGCATGGTTTAGGATCCGTGACACCAGGAAGCATTGGAATTGTGTATTGTATCAGACCAGACAGTGGTCTGTTAATAGAACTGAGCTATCTTCCAAATCAATGGCATTGTGAACCAGAGGAGGTTGAGCATGTTGCTCCCTTTAGGATTGGCAATCGGGTATGTGTTAAGCGTTCTGTTGCAGAACCTAGATATGCTTGGGGTGGTGAGACACATCATAGTCTTGGAACAATAAGTGAGATTGAGAATGATGGTCTCTTAATAATAGATATACCAAATAGGCCCATTCCATGGCAGGCTGATCCATCTGATATGGAGAAGGTGGAAGATTTGAAGGTTGGTGATTGGGTCAGAGTGAAAGCTTCAGTGTCGTCCCCAAAATATGGGTGGGAGGATATTACAAGGAACAGTGTTGGGATAATTCATAGCTTGGATGAGGATGGTGATATTGGTGTTGCCTTCTGCTTCAGAAGTAAGCCTTTTTCTTGCTCAGTAACTGATGTGGATGAAGTTCCTCCTTTTCAGGTGGGACAAGAAATTCATGTGATGGCATCTGTTACTCAGCCACGACTTGGATGGTCAAATGAATCACCAGCTACTGTTGGAAAAGTAGTGAGAATCGACATGGATGGTGCTCTCAATGTGAGAGTCACTGGTAGGCAGAGCTTGTGGAAAGTTTCTCCTGGAGATGCAGAACGACTTCCAGGATTTGAAGTTGGTGATTGGGTTCGCTCAAAACCAAGCCTGGGCACCAGACTAAGTTATGACTGGAATAATGTTGGGAGAGAAAGTTTAGCTGTTGTGCATAGTGTACAGGATTCTGGATACTTGGAGTTAGCTTGCTGTTTCCGTAAAGCGAAGTGGATCACTCACTACACTGATATTGAAAAAGTTCCTAGCTTTAAAGTCGGGCAGTATGTTAGGTTCCGAACTGGTTTGATTGAACCAAGGTGGGGTTGGAGAGGAGCTCAGCCTGAATCGCAAGGGGTTATAACAAGCATTCACGCTGATGGAGAAACCAGGGTTGCATTCTTCGGTTTACCAGGATTGTGGAGAGGAGATCCTTCAGACCTGAAGATTGAGCAAATGTTTGAAGTGGGAGAGTGGGTGAGGTTGAAAGATAATGCAAATAATTGGAAATCAATTGGTCCAGGTAATGTTGGAGTTGTACAAGGAATAGGGTATGAAGGAGATGGATCGGACAGAAGCACTTACATTGGCTTCTGTGGGGAGCCAGAAAAGTGGATAGGACCGAGTTCCCATCTTGAAAGAGTTGACAAGCTTTCTGTTGGACAGAAGGTTAGAGTTAAACAATATGTAAAGCAACCAAGATTTGGGTGGTCAGGGCACACCCATGCCAGTATTGGAACTGTACAGGCAATTGATGCTGATGGAAAACTTCGAATATACACACCAGCAGGATCAAAAGCATGGATGTTGGATCCATCAGAAGTGGAGATAGTAGAAGAGAAGGAGCTTTGCATTGGAGACTGGGTAAGGGTTAGAGCATCAGTTTCAACCCCAACCCACCAGTGGGGGGAAGTGAGTCATTCAAGCATCGGGGTGGTGCATCGGATGGAAGATGAGGATCTGTGGGTGGCATTCTGTTTCATGGAGAGGCTATGGCTATGTAAGGCATGGGAAATGGAGCAGATTAGGCCATTTAAAGTGGGGGATAAGGTAAAGATCAGAGATGGACTGGTGGCCCCACGGTGGGGATGGGGAATGGAGACACATGCCAGCAAGGGACAGGTGGTAGGTGTTGATGCAAATGGAAAACTACGAATAAAATTTCGGTGGAGGGAAGGGAGACCCTGGATAGGAGACCCTGCTGATATCGCCCTTGATGAGAACTGA 4845 0.466 MKIPCCSVCQTRYNEEERVPLLLQCGHVFCRECLSRMFSASSDATLTCPRCRHVSTIGNSVQALRKNFAVLALIHSAANAANLDCDYTDDDDASGEVEDDEEKRRRLCGSQTSSSGGCEQVIEVGAHQEMKLVERIGEGRRAGVEMWTAVIGGSVGRRHRVAVKKVMVVEGMDLEWVQGKLENLRRASMWCRNVCTFHGAMKVEESLCLVMDRCYGSVQSEMQRNEGRLTLEQVLRYGADIARGVLELHAAGVVCMNLKPSNLLLNANGHAVVSDYGLATILKKPSCWKARPECDSSKIHSCMECIMLSPHYTAPEAWEPVKKSLNLFWDDAIGISSESDAWSFGCTLVEMCTGSIPWAGLSTEEIYRAVVKAKKLPPQYASVVGGGIPRELWKMIGECLQFKPSKRPTFNAMLAIFLRHLQEIPHSPPPSPDNDFAKGSVSNVTEPSQVPELDVPQENPNHLHRLVSEGDATGVRDLLAKVALENGNNYISSVLETQNADGQTALHLACRRGSAELVEAILEYEEANVDVLDKDGDPPLVFALAAGSPECVHSLITRNANVRSRLRDGLGPSVAHVCAYHGQPDCMRELLLAGADPNAVDDEGESVLHRAISKKYTDCALMILENGGCRSMAILNSKNLTPLHLCVATWNVTVVKRWVEIATSDDITEAIDIPSSIGTALCMAAASKKDHESEGRELVWILLAAGADPSAQDSQNGRTVLHTAAMTNDVDLVKVILAAGVDVNIRNVHNSIPLHLSLDRGAKACVGLLLAAGADCNLQNDDGDTAFHIAAETAKMIRENLDWLTVMLRIPNADIEVRNHSGKTLRDILEALPREWISEDLMEALMSRGVCLSPTIFEVGDWVKFRRTVITPTNGWQGARQKSVGFVQSVPDRDNIVVSFCSGEVHVLANEVVKVIPLDRGQHVQLKEDVKKPRFGWREQARDSIGTVLCVDDDGILRVGFPGASRGWKADPAEMERVEEFKVGDWVRIRPNLTSAKHGLGSVTPGSIGIVYCIRPDSGLLIELSYLPNQWHCEPEEVEHVAPFRIGNRVCVKRSVAEPRYAWGGETHHSLGTISEIENDGLLIIDIPNRPIPWQADPSDMEKVEDLKVGDWVRVKASVSSPKYGWEDITRNSVGIIHSLDEDGDIGVAFCFRSKPFSCSVTDVDEVPPFQVGQEIHVMASVTQPRLGWSNESPATVGKVVRIDMDGALNVRVTGRQSLWKVSPGDAERLPGFEVGDWVRSKPSLGTRLSYDWNNVGRESLAVVHSVQDSGYLELACCFRKAKWITHYTDIEKVPSFKVGQYVRFRTGLIEPRWGWRGAQPESQGVITSIHADGETRVAFFGLPGLWRGDPSDLKIEQMFEVGEWVRLKDNANNWKSIGPGNVGVVQGIGYEGDGSDRSTYIGFCGEPEKWIGPSSHLERVDKLSVGQKVRVKQYVKQPRFGWSGHTHASIGTVQAIDADGKLRIYTPAGSKAWMLDPSEVEIVEEKELCIGDWVRVRASVSTPTHQWGEVSHSSIGVVHRMEDEDLWVAFCFMERLWLCKAWEMEQIRPFKVGDKVKIRDGLVAPRWGWGMETHASKGQVVGVDANGKLRIKFRWREGRPWIGDPADIALDEN* 1615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0628 1614 CDD RING-HC_ScPSH1_like 5 52 - -
Lan2g0628 1614 Pfam Ankyrin repeats (many copies) 573 622 IPR002110 GO:0005515
Lan2g0628 1614 ProSitePatterns Zinc finger RING-type signature. 25 34 IPR017907 -
Lan2g0628 1614 SMART ring_2 6 51 IPR001841 -
Lan2g0628 1614 Gene3D - 763 832 IPR036770 -
Lan2g0628 1614 ProSiteProfiles Zinc finger RING-type profile. 6 52 IPR001841 -
Lan2g0628 1614 MobiDBLite consensus disorder prediction 427 459 - -
Lan2g0628 1614 Gene3D - 631 762 IPR036770 -
Lan2g0628 1614 Pfam Ankyrin repeats (3 copies) 695 780 IPR002110 GO:0005515
Lan2g0628 1614 Pfam Ankyrin repeats (3 copies) 473 563 IPR002110 GO:0005515
Lan2g0628 1614 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG 2 1613 IPR044584 GO:0004842|GO:0006952|GO:0009738|GO:0016567
Lan2g0628 1614 ProSiteProfiles Ankyrin repeat region circular profile. 749 781 - -
Lan2g0628 1614 SUPERFAMILY Ankyrin repeat 497 792 IPR036770 -
Lan2g0628 1614 ProSiteProfiles Ankyrin repeat region circular profile. 716 747 - -
Lan2g0628 1614 PRINTS Ankyrin repeat signature 502 517 IPR002110 GO:0005515
Lan2g0628 1614 PRINTS Ankyrin repeat signature 732 746 IPR002110 GO:0005515
Lan2g0628 1614 ProSiteProfiles Protein kinase domain profile. 130 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0628 1614 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 84 IPR013083 -
Lan2g0628 1614 Pfam Protein kinase domain 133 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0628 1614 Pfam RING-type zinc-finger 6 49 IPR027370 -
Lan2g0628 1614 ProSiteProfiles Ankyrin repeat profile. 570 602 IPR002110 GO:0005515
Lan2g0628 1614 Gene3D Transferase(Phosphotransferase) domain 1 126 430 - -
Lan2g0628 1614 ProSiteProfiles Ankyrin repeat region circular profile. 501 523 - -
Lan2g0628 1614 SUPERFAMILY RING/U-box 4 74 - -
Lan2g0628 1614 Gene3D - 569 630 IPR036770 -
Lan2g0628 1614 ProSiteProfiles Ankyrin repeat profile. 501 534 IPR002110 GO:0005515
Lan2g0628 1614 PANTHER E3 UBIQUITIN-PROTEIN LIGASE KEG-LIKE 2 1613 - -
Lan2g0628 1614 SUPERFAMILY Protein kinase-like (PK-like) 131 447 IPR011009 -
Lan2g0628 1614 Pfam Mind bomb SH3 repeat domain 981 1101 IPR040847 -
Lan2g0628 1614 Pfam Mind bomb SH3 repeat domain 1490 1608 IPR040847 -
Lan2g0628 1614 Pfam Mind bomb SH3 repeat domain 1107 1151 IPR040847 -
Lan2g0628 1614 Pfam Mind bomb SH3 repeat domain 1233 1354 IPR040847 -
Lan2g0628 1614 Pfam Mind bomb SH3 repeat domain 1360 1481 IPR040847 -
Lan2g0628 1614 Pfam Mind bomb SH3 repeat domain 857 975 IPR040847 -
Lan2g0628 1614 Pfam Mind bomb SH3 repeat domain 1163 1225 IPR040847 -
Lan2g0628 1614 MobiDBLite consensus disorder prediction 92 115 - -
Lan2g0628 1614 ProSiteProfiles Ankyrin repeat profile. 749 781 IPR002110 GO:0005515
Lan2g0628 1614 ProSiteProfiles Ankyrin repeat profile. 716 748 IPR002110 GO:0005515
Lan2g0628 1614 Gene3D - 456 568 IPR036770 -
Lan2g0628 1614 SMART ANK_2a 716 745 IPR002110 GO:0005515
Lan2g0628 1614 SMART ANK_2a 535 564 IPR002110 GO:0005515
Lan2g0628 1614 SMART ANK_2a 749 778 IPR002110 GO:0005515
Lan2g0628 1614 SMART ANK_2a 676 711 IPR002110 GO:0005515
Lan2g0628 1614 SMART ANK_2a 501 531 IPR002110 GO:0005515
Lan2g0628 1614 SMART ANK_2a 570 599 IPR002110 GO:0005515
Lan2g0628 1614 SMART ANK_2a 603 634 IPR002110 GO:0005515
Lan2g0628 1614 SMART ANK_2a 638 669 IPR002110 GO:0005515
Lan2g0628 1614 SMART ANK_2a 782 817 IPR002110 GO:0005515
Lan2g0628 1614 MobiDBLite consensus disorder prediction 436 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0628 Lan-Chr2 10804472 10834354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0628 193 414 MAP Kinase Kinase Kinase AT2G31800 29.646 7.19e-16 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Lan2g0628 Pkinase 1.9e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0628 K16279 - gmx:100777576 2984.51