Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0605 ATGGATTGTTCATCATGGATTGACACGTCCTTGGATCTCAACCTTAATTCATATAGAGCTCATGAAGAGGTTACTCAGAAGGAGGTAGAAAGCAAATTATTCTCATTGGGGATGACCAAGTTTCCTGTGAAAGAGGAGTGTACTATTATTAAGTTGGAAATGGAACTGAAGAGGGTGAGTGCAGAAAACAAGAAATTGGTGGATATGCTCTCAGTTGTGTGTGAGAATTACAACAATTTGAGAAGCCAATTGATGGAATATATGAGCAAAAATCCTGAAAAGGAATTCAACCCATCTTCAAAGAAAAGAAAGTCTGAAAGCAGTAACAATAATAGTAACCTGATGGGAATTAATAACTTTGAAAGCAGCTCCACCAATGAAGAATCTTGCAAGAAACAAAGGGAAGAACCAAAAATTTCAACAGTTTATGTGAGGACAGAATCATCTGATACAAGCCTTGTTGTGAAAGATGGATACCAATGGAGGAAGTATGGACAAAAGGTGACTAGAGATAATCCTTGTCCAAGAGCATACTTCAAATGTTCTTTTGCTCCAACCTGCCCTGTGAAAAAGAAGGTGCAAAGAAATGTAGATGATCAATCTGTCCTTGTTGCAACTTATGAAGGGGATCACAATCATACTCACCCTTTGGCACCAACAGTTACTACCCTTGACTTGGTAAAATCTAAGTGCAGCAATGATTCCAAGAGCACAAAACCAAAAATTGATTCATCTCATCAAGTAGTACCAAATATCATGGTGCAACAAATGGCTACTTCATTGACCATGGATCCTAATTTCAGAGAAGCACTTGTGGCAGCTATATCAGGGAGGTTCTTGCAGAACAATTAA 852 0.3826 MDCSSWIDTSLDLNLNSYRAHEEVTQKEVESKLFSLGMTKFPVKEECTIIKLEMELKRVSAENKKLVDMLSVVCENYNNLRSQLMEYMSKNPEKEFNPSSKKRKSESSNNNSNLMGINNFESSSTNEESCKKQREEPKISTVYVRTESSDTSLVVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPTCPVKKKVQRNVDDQSVLVATYEGDHNHTHPLAPTVTTLDLVKSKCSNDSKSTKPKIDSSHQVVPNIMVQQMATSLTMDPNFREALVAAISGRFLQNN* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0605 283 Pfam WRKY DNA -binding domain 156 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g0605 283 SMART WRKY_cls 155 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g0605 283 Coils Coil 49 69 - -
Lan2g0605 283 MobiDBLite consensus disorder prediction 103 126 - -
Lan2g0605 283 ProSiteProfiles WRKY domain profile. 150 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g0605 283 SUPERFAMILY WRKY DNA-binding domain 151 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan2g0605 283 PANTHER TRANSCRIPTION FACTOR 219 283 - -
Lan2g0605 283 PANTHER TRANSCRIPTION FACTOR 1 215 - -
Lan2g0605 283 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 215 IPR044810 GO:0003700
Lan2g0605 283 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 219 283 IPR044810 GO:0003700
Lan2g0605 283 MobiDBLite consensus disorder prediction 91 138 - -
Lan2g0605 283 Gene3D WRKY domain 138 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0605 Lan-Chr2 9766170 9768436 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0605 4 283 WRKY Transcription Factor Family AT1G80840 46.708 4.54e-82 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan2g0605 WRKY 3.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0605 - - lang:109335432 549.28