Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0603 ATGGCAAATGCTATAAAAGCAGCAATTGGAGATGCAGTAATGACCTTCTTGTGGGTCTTATGCTCTTCCACGTTGGGGATAGCTACTAGTGCCATAACTAAAGCACTTGATGTTCAGAACATTTCATACAATGGTTTTGCTTACCCTTCATTTTTTGTCACTGCTTTCCTTGTCCTTGCGCTTGTCTTTATCTTTACCATCATTGGTGATGCATTGGGTGGTGCCAGCTTCAACCCCACAGGCACATCTTCTTTTTATGTTGTTGGTCTGGGTTCTGATACTCTCATCTCAATGGCTCTCCGTTTTCCTGCACAGGCTCTTGGCGCTGCTGCTGGTGCTATTGCAATTACGGAGGTGATTCCTAAGGAATACAAGCACATGTTGGGGGGACCTTTTTTGAAAGTTGACTTACATACCGGGGCTGTTGCTGAAGGAGTGTTGACATTTGTGATTACTTTTATTGTTCTCTTAATCATCCTCAAGGGCCCTCGTAGTCAGCTAGTGAAGATTTTGTTGATATCTATATCAACCATAGCTTTGGTCATGGTTGGATCTCCTTACACTGGGCCATCCATGAACCCTGCCAATGCCTTTGGTTGGGCATACTTAAATAACAAGCACAACACATGGGAACAATTCTATGTTTACTGGATTTGCCCCTTCGTTGGTGCAATATTGGCTGCTTGGTTAGTTCGTGCTGTATTTCCCGCACCAGATGCCAAAAAGAAACAGAAGAAAGCATGA 744 0.4368 MANAIKAAIGDAVMTFLWVLCSSTLGIATSAITKALDVQNISYNGFAYPSFFVTAFLVLALVFIFTIIGDALGGASFNPTGTSSFYVVGLGSDTLISMALRFPAQALGAAAGAIAITEVIPKEYKHMLGGPFLKVDLHTGAVAEGVLTFVITFIVLLIILKGPRSQLVKILLISISTIALVMVGSPYTGPSMNPANAFGWAYLNNKHNTWEQFYVYWICPFVGAILAAWLVRAVFPAPDAKKKQKKA* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0603 247 PANTHER AQUAPORIN SIP1-1 3 244 IPR044222 GO:0015250
Lan2g0603 247 SUPERFAMILY Aquaporin-like 4 237 IPR023271 -
Lan2g0603 247 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan2g0603 247 PRINTS Major intrinsic protein family signature 58 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan2g0603 247 PRINTS Major intrinsic protein family signature 97 116 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan2g0603 247 PRINTS Major intrinsic protein family signature 143 161 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan2g0603 247 PRINTS Major intrinsic protein family signature 174 196 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan2g0603 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan2g0603 247 Gene3D Glycerol uptake facilitator protein. 1 246 IPR023271 -
Lan2g0603 247 Pfam Major intrinsic protein 4 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lan2g0603 247 PANTHER AQUAPORIN SIP1-1 3 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0603 Lan-Chr2 9698782 9701481 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0603 3 247 Major Intrinsic Protein MIP AT5G18290 51.822 2.18e-79 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0603 K09875 - gmx:100792787 350.517