Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0563 ATGACACGAAGACTGGATGAATACATTGCTTGGGAAGACAATGATACCAGTTCTGCATCTGAAACAGATAACGAAGAGCAAGCACATCTATCAATTATGGCATCTCATCATTCCGATGATGAAGAAGTTACTCCTTCCAAGGCCAATTCTGTTTTTGAGGCTCCACCATCTATATGCTGTATGAGGGATTTCATTAAGAACATGATTACCAGAACCTCCCAGGCTGATTGTGCTGTTCTTATCATTGATTCCACCACTGGTGGTTCTGAAGCTAGTATTTCCAAGGATGGACAGACTCGTCGTGAGCATGCTCTCCTTGCATTTACTCTTGGTGTGAAGCAGATGATTTGCTGTTGTTACAAGATGGATGCCACTACACCTAAGTACTCTAAGGCCAGGTATGATGAAATCTTGAAGGAAGTTTCTTCCTACATGAAGAATGTAGAGAAGAAGGATCCTACTGGAGCCAAGGTCACCAAGGCTGCAGCAAAGAAGTGTATGGTGCAGGATGCTTTGTCTAGGGAAGTTTATCGATGCAATAAATGTTGGTTACTTGTTTGCAGTATTTTATATTTTCTAGGTAGTTTGTTTGTTGGGCACATATTGAAGTCTGCTCCATCATCTCGCAAGTTTTATTCCCAGAACTGGGTTCTGGATCGCGGGTGGCAAGGTTTTATCGGTGTTTTTATGCATTTTCTACATTTTAATGTGTCACTGCCGTAA 723 0.4177 MTRRLDEYIAWEDNDTSSASETDNEEQAHLSIMASHHSDDEEVTPSKANSVFEAPPSICCMRDFIKNMITRTSQADCAVLIIDSTTGGSEASISKDGQTRREHALLAFTLGVKQMICCCYKMDATTPKYSKARYDEILKEVSSYMKNVEKKDPTGAKVTKAAAKKCMVQDALSREVYRCNKCWLLVCSILYFLGSLFVGHILKSAPSSRKFYSQNWVLDRGWQGFIGVFMHFLHFNVSLP* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0563 240 Gene3D - 15 185 IPR027417 -
Lan2g0563 240 PANTHER TRANSLATION FACTOR 60 148 - -
Lan2g0563 240 PANTHER ELONGATION FACTOR 1-ALPHA-LIKE 60 148 - -
Lan2g0563 240 Pfam Elongation factor Tu GTP binding domain 62 163 IPR000795 GO:0003924|GO:0005525
Lan2g0563 240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 150 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0563 Lan-Chr2 8409421 8418150 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0563 50 148 Eukaryotic Initiation Factors Gene Family AT1G07930 82.828 5.81e-48 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0563 K03231 - ath:AT5G60390 155.992