Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0552 ATGTGGTTTCCAAATACAAAGGCATCAGTTATTAGAAAAGGAGGAAATGGAAATGGATTGGTGGCAGTTGCTATAGATAAGGATAACAAAGGGAGCAGACATGCTCTCAAATGGGCTGCTGATAGTCTTCTTACAAGAGGTCAAACTCTTGTCCTAATCCATGTTTTGCACACCAAGTCCACACTTGTTTCTTCAGGAGGCAGAGAGGCCATAATATGTAACAGCAATAGCCCTGCCCCTGATGCATCTCCACAGAGAGAGGAACTTGTCAGTATTACAAAGGATCTCTTCCATACCTTCCATTGTTATTGCACACGCAAAGATATTCAATGCCTTGATGTCTTACTTGAAGACACTGACGTTGTGAAAGGAATAACAGAATATGTCTCTTATGCTGCAATTGAGAACTTGGTGCTTGGTGCAGCCTCAAGGCATGGCTTTATTAGATTCAAGTCATCAAGTAAACCAAGCAGCATAGCAAAGGGGTCACCAGATTTCTGTACAGTGTATGTGATTTCGAAGGGGAAGATATCTTCAGTCCGGAGTGCTTCTCGTGCAGCCCCACATGCCTCCCCACTTCTGAAAGATATACAGAATTTAAACAATGAGAATAATCCTAAGATCTCCTCCTCTAGACATATGACTATGGGCTCCAGAGATCATCACAGGACATCTATCAAACCTCACAGTTGGCAGGATGAATCCATTAACAGGTCACAAATTGGAAAAAGAATAGGGTTGAGTGGAAGGTCATGCATGGACTACTCAGAATCTGACACAGATATATCATTTGTAAGCTCTGAGAGGCCTAGCACTAGCACTGGACGTTCATCATCTGTTTACACTGACTATATTGATTCAGGCCGCAATTCACGAACTTCAACCAGTTCAGATCGTAGCTTGGGTACTGGGTTCATGTTCACTGACCTTACTTCACAAGATCTTTCATTTTCAAAGGAAAGTAGCTTAACATCATCTTCATATTCATATCAAAACATGGATGAAGCAGAAGTTGATATGAGGAGGTTGAGGCTTGAGTTAAAGCAAATGATGGAAATGTATGGTGCAGCATGCAAAGAAGCACTAACAGCCCAACAAAAGTTAATGGAACTTAACAACCAGAGAACCGATGAAGAAAAAAAAGTAGATGAGGCACGGTTGGCCCAAGAAGCGGCACTTGCAACTGCGGAGAAAGAGAAAGCAAGAAGTAGAGCAGCCATGGAAACAATTGAAGTGGCCACAAAAGTTGTAGAAATGGAATCAAGTAGGAAGATGAATGTTAAAACAGAAGCTCTTAAAGAAGCGGAAGAAATGAGGAAACTATTGAATGATGTAGCCGAAGCTGGTGAAAGATATAAGAAATACACAATTGAGGAGATTGAAATAGCCACAGACTCCTTTTCGGAATCTCGAAAAATAGGGGAAGGAGGCTATGGCCCTGTCTATAAATGTTACCTTGATGACATTCCAGTGGCAGTCAAGGTTCTGCGTCCAGATTCTACTCAAGGGAAGTCACAATTTCAAAAGGAGGTTGACATACTCAGCTGCATGAACCACCCTAACATGGTCTTTCTTCTAGGAGCCTGTCCAGAGCACAGCATACTAATTTATGAGTACATGGAAAATGGAAGCTTAGAAGATTGTCTTTTTCGAAATAAGGATGAAAATCTAATGTCTTGGCAGCTCAGGTTTCAAATTGCTGCAGAGATAGCCACGGGCTTACTCTTCCTCCATGAAACAAAGCCTGAACCATTAGTGCATCGCGATCTCAAACCAAGCAACATTCTACTAGACCACAATTACGTAAGTAAGATTAGTGATGTTGGATTGGCCAGGATTCTCCCTGTTGTAGCTGAAAATGTAACTCAATGTCACATGACTTCAGCGGCTGGAACTTTTTGTTATATCGATCCGGAATATCAGCAAACAGGAACAGTTGGTGTTAAGTCTGATGTATATTCTCTAGGGATCATACTTCTTCAATTATTGACAGGTAGGCCACCAATGGGTTTGGCTTATCAGGTTGGAGAGTCTATTGAGAATGACAAGTTTGTTGAAATGCTTGACAAATCTGTGCCTGAGTGGCCTCTTGAAGAAGCATTGTGTCTTGCAAAAGTGGCAGTCAAATGTGTAGAACTCAGACGAAAAGATCGACCAGACCTCGGCAAAGAAGTGTTGCCAGAGCTCCAAAAACTGAGAGAGTTTGCTGAAGATATCATGAGTCCGATTACCGACTTTTTTGGTGAAGATAGCAGTAGTGAACCTTCCCCTAGTCAGAGTCATGCTTCAACAAGTTCTTCACCCTCATCAACACCAATACAAGGGGCCAACTCTGAATAA 2340 0.4197 MWFPNTKASVIRKGGNGNGLVAVAIDKDNKGSRHALKWAADSLLTRGQTLVLIHVLHTKSTLVSSGGREAIICNSNSPAPDASPQREELVSITKDLFHTFHCYCTRKDIQCLDVLLEDTDVVKGITEYVSYAAIENLVLGAASRHGFIRFKSSSKPSSIAKGSPDFCTVYVISKGKISSVRSASRAAPHASPLLKDIQNLNNENNPKISSSRHMTMGSRDHHRTSIKPHSWQDESINRSQIGKRIGLSGRSCMDYSESDTDISFVSSERPSTSTGRSSSVYTDYIDSGRNSRTSTSSDRSLGTGFMFTDLTSQDLSFSKESSLTSSSYSYQNMDEAEVDMRRLRLELKQMMEMYGAACKEALTAQQKLMELNNQRTDEEKKVDEARLAQEAALATAEKEKARSRAAMETIEVATKVVEMESSRKMNVKTEALKEAEEMRKLLNDVAEAGERYKKYTIEEIEIATDSFSESRKIGEGGYGPVYKCYLDDIPVAVKVLRPDSTQGKSQFQKEVDILSCMNHPNMVFLLGACPEHSILIYEYMENGSLEDCLFRNKDENLMSWQLRFQIAAEIATGLLFLHETKPEPLVHRDLKPSNILLDHNYVSKISDVGLARILPVVAENVTQCHMTSAAGTFCYIDPEYQQTGTVGVKSDVYSLGIILLQLLTGRPPMGLAYQVGESIENDKFVEMLDKSVPEWPLEEALCLAKVAVKCVELRRKDRPDLGKEVLPELQKLREFAEDIMSPITDFFGEDSSSEPSPSQSHASTSSSPSSTPIQGANSE* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0552 779 Coils Coil 361 388 - -
Lan2g0552 779 MobiDBLite consensus disorder prediction 199 238 - -
Lan2g0552 779 MobiDBLite consensus disorder prediction 199 213 - -
Lan2g0552 779 Gene3D Phosphorylase Kinase; domain 1 437 539 - -
Lan2g0552 779 Coils Coil 393 413 - -
Lan2g0552 779 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 22 172 - -
Lan2g0552 779 Coils Coil 428 458 - -
Lan2g0552 779 Pfam Protein kinase domain 468 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0552 779 Gene3D Transferase(Phosphotransferase) domain 1 540 744 - -
Lan2g0552 779 MobiDBLite consensus disorder prediction 263 300 - -
Lan2g0552 779 CDD STK_N 20 175 - -
Lan2g0552 779 Coils Coil 333 353 - -
Lan2g0552 779 SMART serkin_6 467 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0552 779 MobiDBLite consensus disorder prediction 214 229 - -
Lan2g0552 779 Pfam Universal stress protein family 21 163 IPR006016 -
Lan2g0552 779 ProSiteProfiles Protein kinase domain profile. 467 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0552 779 PANTHER BNAA05G18880D PROTEIN 16 767 - -
Lan2g0552 779 MobiDBLite consensus disorder prediction 744 779 - -
Lan2g0552 779 ProSitePatterns Serine/Threonine protein kinases active-site signature. 585 597 IPR008271 GO:0004672|GO:0006468
Lan2g0552 779 Gene3D HUPs 9 172 IPR014729 -
Lan2g0552 779 PANTHER OS02G0152300 PROTEIN 16 767 - -
Lan2g0552 779 SUPERFAMILY Protein kinase-like (PK-like) 451 721 IPR011009 -
Lan2g0552 779 MobiDBLite consensus disorder prediction 746 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0552 Lan-Chr2 7918138 7922926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0552 1 770 Receptor kinase-like Gene Family AT1G78940 51.960 0.0 754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lan2g0552 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0552 - - lang:109357274 1178.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0562 9 8321867 8326763 Lan2g0552 2 7918138 7922926 LSH
Lan6g1814 6 29477077 29480165 Lan2g0552 2 7918138 7922926 PCT
Lan2g0552 2 7918138 7922926 Lan6g1814 6 29477077 29480165 PCT