Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0549 ATGTTACCTAATCAAGCTGGGTCTCAGTTGCCTGGACTGACTCAACTAACTGGGAATGCCCTTTCTCCGCAAATGTCAAATTTATGTGGTGTACCGCGTTCTGCAATCAATATGGACCCAGAATTTCTTATGGCACGCTCATCTATGCAAGAGAGGATCTGTGATATTTTATTGCAACGACAACCAGAACCAGTTACAGAAGTACAGAGAAGGAAAGTTCGGGATCTTGCAAAACGCCTGGAGGAGGGCATGTTAAAATCTGCTCGCTCTAAGGAGGACTACATGAACTTGGAGACACTTGAGACTCGTTTATCTAATTTCCTCAGACGGGCATCAATGAATAATCACAATCAACAGTATCCACAGCTCGTTGGCTCTTCCCCAATTGGTACAATGATACCAACTCCTGGTTTGTCTAATGGTTATCAACAGTCTTCTGCCAGTTTTTCTATTGGATCGGGAACAAACATGTCATCAATAGGGGTGCAAAGAACTGGAAGCCAGATGATTCCCACTCCTAGATTTAATGTCAGCAGTAATCACTCAAATATGACTATGGATTCTTCTACTAACAGCAGCGCCTTTTCTGGTGTAGATTCTATGATGGTACCACAGCCACAGCTGCAGCAGCAGATGCAGCATATCAGTGGCCAAAATAGTCATGTATTGCAGAACCTTGGCAGACAAATGGGTAATGGAGTGAGATCTGGTTTACTGCAAAAATCCTTTGCAAACTCAAATGGTGCTATAAATGGCGGGTTAGGCTTGATTGGAAACAACACAGCAAATGAACCCAGCACTTCTGATGGCTATGCGTCAACTTATGCTAATTCCCCTAAACACTTACAGCAGCACTTTGATCAAAATCAGCAAACAGTTGTGCATGGTGATGGATATGGATCGCATAATGTTGATACTTTTGCTTCTGGAAATTTTTATGCTTCTACGACATCCTCTGGCTCTACGATGAACACTCAGAACATGAATTCAGTTAAATTGCCATCAATTCCCAAAACTAGCTCACTGATAGGTGGTCACTTGAATTTGCACGGTATGCAGCAGGCTACTCATATAAAGTCTGAAGCAGTTAATCAGTCCGAAAAGTTGAATTTTCAGTCTTCATTGACTTCAAGAGAAGGCCTTCTGCATTCTCAACAGCAATATCAACAAAGGCCGCAACAATTTCAACAGCCAGAGCAGTATGCACAGCAGCAATTTCAACTGAAGCAGCAAAGTCAACAACCTCAACATTTGGTCAATAGTGATACTTTCATTCCATCTCAGATAACTGCTAATTTAGAAAGCCGAGTGAAGTCTGAGCCTGGAGTTGAACATCATAAAGAGGTGCTCAATTCTCACATTTCTGAACAGTTCCATATGTCTGAGATGCAGAGTCAGTTCCAGCAGAATTTGTCTGAAGATTGCTCTGGGGGTGGTCAACATCGTTCTTTTCCTTCTGGTCAGCATGATATGTCCTTTTCAACACCTCAAAATTCACAACAAATGTTGCTCCCACACCACCAATTGGTTGCTGAGTCTCAAAATAGTTTTAGCTCTCTTACCATTGGGGCACAATCCAAATCAGTTGTTCCAAATCAATGGCCTCAATCTCAAGATGGTAACCACATACCTGGGAATGTTTCACATGACCAACATCTTCAAATGGATTTTCAACAAAGAATATCAGGCCAAGATGAAGCTCAATGCAATAACTTATCATCAGATGGATCTATTATTGGTCACGCTGCTGCTTCTAGGGGCTCAATCGACCTGTTAGATTCGGGCAGTGCTATCAAAAAGGCGCACAAAAATCAACAGAGATGGCTTTTATTTCTACTCCATGCTCGACGATGTTCTGCTCCCGAAGGACAATGCCAAGAACGCTTTTGTTCTCTTGCGCAAAAGTTATGTAAGCACATAGATGGATGCACCCTGCGCCATTGTCCATATCCTCGTTGTCATCATACTAGAGTATTGCTTCATCATTTCATAAACTGCAAGGATCCATGTTGCCCCGTTTGTGTTTTTGTAAGAAATTATCGACGTGCATTTCAACTCAAGCATCAGATTCGGCCAGAAGCTGAATCAAGTTTGCCAATTGCAGTAAATGGATCCTGTAAATCATACAATATTGTAAGTTCATCGCCAAGATTGATCTCAAAGCCTCCACTAGTTGTGGAAACTTCAGAATACCCGCATCCATCTCTAAAACGCATAAAGACTGAGCACATCATGCAGTCCATTAATCCTGAAAATGACAACTGTGCTTCATCTGTTTCTGCAAATTGTGAATCACATCTTGCCAGGGATGCTCAGAACCAAGCCTATCCCAGTGTTGAGATGCCTATCTCAATTAAACCTGAACTTACGGAAGCTAAGGCAGAAGTTCCAGCACATTTGGTACATGAAAAGCTTAGTGAAATGGAAATAGATAACAATAATGCAGATGATAAAATGCCCGGTGGTGAACGTGTCAAATATGATGAACCTGATAATTTAGCTAGGACAGAAAGCACTAAAACTGAGAAGGAGACGGGACAAGGAAAACAAGAAAATGTGATACAGCCTTCTGAAAATGCAGCTGGAACCAAATCAGGCAAGCCAAAAGTAAAGGGGGTCTCACTTACAGAATTATTTACTCCAGAGCAAGTCAGGGAACATATCACTGGCCTCAGGCAGTGGGTTGGCCAAAGCAAATCAAAAGTAGAGAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAACTCCTGTCAATTGTGTGCTGTTGAGAAGCTTACTTTTGAACCCCCACCTATTTACTGCACAACTTGTGGTGTCCGCATTAAACGAAATAATATGTATTACACCATGGGTGCTGGTGATACACGGCATTATTTTTGTATTCCATGCTATAATGATGCTCGTTCAGAGAACATTAACGTTGATGGGACTCCCATTCCCAAGTCAAGATTGGAAAAGAAGAAGAATGATGAGGAAACTGAAGAATGGTGGGTTCAATGTGATAAATGTGAAGCTTGGCAACACCAGATTTGTGCGTTATTTAATGGTAGAAGAAATGATGGTGGACAAGCTGAATACACTTGCCCTAACTGCTACATTGAAGAGGTCGAAAGAGGAGAGCGCAAACCGTTACCCCAAAGTGCTGTTCTTGGAGCGAAGGATTTGCCAAAAACTATTCTCAGTGACCAGATAGAACAACGATTATTTAGACGACTGAGGCAAGAAAGGCAAGAGAGGGCAAGGGTTCAAGGGAAAAGTTATGATGAGGTGCCTGGAGCTGATTTCCTTGTTGTAAGGGTTGTTTCATCTGTTGACAAGAAGTTAGAAGTGAAACAGCGGTTTTTGGAGATTTTTCAAGAAGAAAATTACCCAACAGAATTCCCATACAAATCCAAGGTAGTTTTGTTGTTTCAGAAAATTGAAGGTGTGGAAGTCTGCCTATTTGGCATGTATGTTCAAGAATTTGGATCTGAAGCTGAATTTCCCAATCAGCGCCGGGTGTATCTTTCATATCTGGACTCTGTGAAGTATTTTAGACCTGAAGTTAGAGCAGTGACTGGAGAGGCTCTCCGGACATTTGTTTATCACGAAATCCTGATTGGATACCTTGAATATTGCAAGAAGCGTGGTTTTACTAGCTGCTATATATGGGCATGTCCTCCGTTGAAGGGTGAAGACTATATCCTATATTGTCATCCGGAAATTCAGAAAACACCAAAATCTGATAAGCTTCGGGAGTGGTATCTGGCCATGTTAAGAAAAGCTGCCAAGGAGAATGTTGTGGTTGATCTAACCAACTTATACGATCATTTCTTTGTATCTACCGGGGAATGTAGGGCTAAGGTTACAGCTGCAAGACTTCCATATTTTGATGGAGACTACTGGCCTGGGGCTGCAGAGGATTTGATTTATCAGCTTCGCCAAGAGGAAGATGGAAGAAAACAAAATAAGAAAGGAACAACTAAAAAGACTATAACAAAAAGGGCTTTAAAAGCGTCTGGTCATTCAGATCTTTCTGGAAATGCCTCAAAAGATCTTATCCTTATGCACAAACTTGGCGAAACCATTAGTCCAATGAAGGAAGATTTTATTATGGTTCATTTGCAGCATGCATGTACCCACTGTTGTATTCTAATGGTGTCTGGAAACCGTTGGGTTTGCAACCAGTGCAAAAATTTTCAGATTTGTGATAAGTGTTATGAAGCAGAAATAAAGCGTGAGGAGAGAGAAAGACATCCTATTAATCAGAGGGAAAAACATTCCTTTCATCGGGTTGAAATTACTGATGTACCAGTTGATACAAAGGACAAAGATGATATTCTTGAGAGTGAATTCTTTGACACTAGACAAGCATTTCTGAGTCTCTGTCAGGGAAACCATTATCAGTATGATACACTAAGGCGGGCCAAGCATTCCTCAATGATGGTCCTCTATCATCTTCATAATCCAACTGCTCCTGCATTTGTTATAACTTGTAATATATGCTATCTTGACATAGAAACTGGCCAAGGTTGGCATTGTGAAGTTTGCCCTGAGTACGATATATGCAATGGCTGTTACCAAAAGGATGGAGGCATTGATCATTCTCATAAGTTGACAAATCATCCATCAATTGCAGATCGTGATGCTCAGAACAAAGAAGCAAGACAGCTTCGAGTGTTGCAGCTACGGAAAATGCTTGATCTGCTTGTGCATGCATCCCAATGTCGTTCTGCACATTGCCAATATCCAAATTGTCGCAAGGTAAAGGGCCTTTTCCGCCATGGGATGCACTGCAAAACTCGTGCATCCGGAGGTTGTGTTCTTTGCAAGAAGATGTGGTATTTGCTTCAACTTCATGCTCGTGCATGCAAAGAATCTCAGTGCCACGTACCACGTTGCAGAGATTTAAAAGAACATTTACGGAGGTTACAGCAACAATCTGATTCACGACGTAGAGCTGCTGTAATGGAGATGATGAGGCAGAGAGCTGCAGAAGTTGCCAACAATGCTGGATGA 4998 0.417 MLPNQAGSQLPGLTQLTGNALSPQMSNLCGVPRSAINMDPEFLMARSSMQERICDILLQRQPEPVTEVQRRKVRDLAKRLEEGMLKSARSKEDYMNLETLETRLSNFLRRASMNNHNQQYPQLVGSSPIGTMIPTPGLSNGYQQSSASFSIGSGTNMSSIGVQRTGSQMIPTPRFNVSSNHSNMTMDSSTNSSAFSGVDSMMVPQPQLQQQMQHISGQNSHVLQNLGRQMGNGVRSGLLQKSFANSNGAINGGLGLIGNNTANEPSTSDGYASTYANSPKHLQQHFDQNQQTVVHGDGYGSHNVDTFASGNFYASTTSSGSTMNTQNMNSVKLPSIPKTSSLIGGHLNLHGMQQATHIKSEAVNQSEKLNFQSSLTSREGLLHSQQQYQQRPQQFQQPEQYAQQQFQLKQQSQQPQHLVNSDTFIPSQITANLESRVKSEPGVEHHKEVLNSHISEQFHMSEMQSQFQQNLSEDCSGGGQHRSFPSGQHDMSFSTPQNSQQMLLPHHQLVAESQNSFSSLTIGAQSKSVVPNQWPQSQDGNHIPGNVSHDQHLQMDFQQRISGQDEAQCNNLSSDGSIIGHAAASRGSIDLLDSGSAIKKAHKNQQRWLLFLLHARRCSAPEGQCQERFCSLAQKLCKHIDGCTLRHCPYPRCHHTRVLLHHFINCKDPCCPVCVFVRNYRRAFQLKHQIRPEAESSLPIAVNGSCKSYNIVSSSPRLISKPPLVVETSEYPHPSLKRIKTEHIMQSINPENDNCASSVSANCESHLARDAQNQAYPSVEMPISIKPELTEAKAEVPAHLVHEKLSEMEIDNNNADDKMPGGERVKYDEPDNLARTESTKTEKETGQGKQENVIQPSENAAGTKSGKPKVKGVSLTELFTPEQVREHITGLRQWVGQSKSKVEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTMGAGDTRHYFCIPCYNDARSENINVDGTPIPKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIEEVERGERKPLPQSAVLGAKDLPKTILSDQIEQRLFRRLRQERQERARVQGKSYDEVPGADFLVVRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGSEAEFPNQRRVYLSYLDSVKYFRPEVRAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLRKAAKENVVVDLTNLYDHFFVSTGECRAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGHSDLSGNASKDLILMHKLGETISPMKEDFIMVHLQHACTHCCILMVSGNRWVCNQCKNFQICDKCYEAEIKREERERHPINQREKHSFHRVEITDVPVDTKDKDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVITCNICYLDIETGQGWHCEVCPEYDICNGCYQKDGGIDHSHKLTNHPSIADRDAQNKEARQLRVLQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESQCHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG* 1666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0549 1665 ProSiteProfiles Zinc finger TAZ-type profile. 596 677 IPR000197 -
Lan2g0549 1665 Pfam Zinc finger, ZZ type 1489 1522 IPR000433 GO:0008270
Lan2g0549 1665 CDD PHD_HAC_like 959 1031 - -
Lan2g0549 1665 Pfam PHD-finger 990 1032 IPR019787 -
Lan2g0549 1665 Pfam TAZ zinc finger 1557 1627 IPR000197 -
Lan2g0549 1665 Pfam TAZ zinc finger 606 674 IPR000197 -
Lan2g0549 1665 PANTHER ZINC FINGER, TAZ-TYPE-RELATED 145 1664 - -
Lan2g0549 1665 MobiDBLite consensus disorder prediction 804 847 - -
Lan2g0549 1665 PANTHER CBP/P300-RELATED 145 1664 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lan2g0549 1665 ProSitePatterns Zinc finger PHD-type signature. 960 1031 IPR019786 -
Lan2g0549 1665 ProSitePatterns Zinc finger ZZ-type signature. 1492 1519 IPR000433 GO:0008270
Lan2g0549 1665 ProSiteProfiles Zinc finger ZZ-type profile. 1487 1545 IPR000433 GO:0008270
Lan2g0549 1665 MobiDBLite consensus disorder prediction 380 415 - -
Lan2g0549 1665 Gene3D - 1485 1537 IPR043145 -
Lan2g0549 1665 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1049 1485 IPR031162 GO:0004402
Lan2g0549 1665 SUPERFAMILY TAZ domain 601 681 IPR035898 -
Lan2g0549 1665 SUPERFAMILY RING/U-box 1468 1535 - -
Lan2g0549 1665 Gene3D - 1363 1425 IPR043145 -
Lan2g0549 1665 ProSiteProfiles Zinc finger TAZ-type profile. 1547 1630 IPR000197 -
Lan2g0549 1665 ProSiteProfiles Zinc finger ZZ-type profile. 1367 1430 IPR000433 GO:0008270
Lan2g0549 1665 MobiDBLite consensus disorder prediction 471 497 - -
Lan2g0549 1665 Pfam Histone acetylation protein 1093 1310 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lan2g0549 1665 SUPERFAMILY FYVE/PHD zinc finger 993 1033 IPR011011 -
Lan2g0549 1665 SUPERFAMILY TAZ domain 1549 1632 IPR035898 -
Lan2g0549 1665 SMART KAT11_2 1082 1379 IPR013178 GO:0004402|GO:0006355|GO:0016573
Lan2g0549 1665 Gene3D TAZ domain 594 682 IPR035898 -
Lan2g0549 1665 SMART TAZ_2 599 677 IPR000197 -
Lan2g0549 1665 SMART TAZ_2 1550 1628 IPR000197 -
Lan2g0549 1665 MobiDBLite consensus disorder prediction 848 862 - -
Lan2g0549 1665 MobiDBLite consensus disorder prediction 1313 1337 - -
Lan2g0549 1665 MobiDBLite consensus disorder prediction 804 870 - -
Lan2g0549 1665 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 984 1032 IPR013083 -
Lan2g0549 1665 Gene3D TAZ domain 1544 1661 IPR035898 -
Lan2g0549 1665 SUPERFAMILY RING/U-box 1347 1403 - -
Lan2g0549 1665 SMART zz_5 1366 1410 IPR000433 GO:0008270
Lan2g0549 1665 SMART zz_5 1486 1532 IPR000433 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0549 Lan-Chr2 7836928 7855513 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Lan2g0549 HAT_KAT11 7.3e-30 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0549 K04498 - gmx:100809207 2743.38