Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0537 ATGTCTCACTTCGGAAGGTCTGGTCCCCCAGATATCTCCGACACTTACTCTCTCCTCGTCCTCAACATCACTTTCCGTACCACCGCTGACGACCTATTCCCTCTATTTGATAAGTACGGCAAGGTTGTCGACATCTTCATCCCAAGGGATCGAAGGACTGGTGAATCAAGGGGTTTTGCATTTGTGCGCTATAAGTACGGTGATGAAGCTTCAAAGGCTGTGGATAGGCTCGACGGAAGAATGGTTGATGGTCGTGAAATAACTGTTCAGTTTGCGAAGTATGGTCCACATGCTGAGAGGATTCACAAAGGAAGGATTATTGAAACATCCCCAAAACCAAATTCAAGGCACAGGTCAAGGAGCCGCAGTCCCAGGAAAAGGCATCGTGATGACTACCGAGACAGGGACTATAGGAGGAGAAGCCGCAGCAGAAGTTATGATAGATATGAACGTGACAGATACCGTGGGAGAGACAGAGATTATCGTCGCCGAAGCAGGAGCCGCAGTGCCAGTCCAGATTACAAGAGTCGTAGAAAGGGACGCTATGATGATGAGCGTCATAGCAGGAGCCCAAGCCGGTCTGTGGATAGCCGCTCCCCTGCCCGACACAGTCCTAGTCCTCGAAGGAGTCCTTCCCCAAAGAAGAGTATTTCCCCTCAAAGGATTGCTTCCCCAAGGAAAAGTCCACGGGTTGAAAGTCCTGACAATCATAGCCGTGATGGACGACGGTCTGCTTCACCTCACAGTGTCTCACCACATGGTCGCCCTGATTCTTCGCGAAGCCCATCCCCTCGAAACTCCAATGGTGATGAATGA 816 0.5074 MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYGDEASKAVDRLDGRMVDGREITVQFAKYGPHAERIHKGRIIETSPKPNSRHRSRSRSPRKRHRDDYRDRDYRRRSRSRSYDRYERDRYRGRDRDYRRRSRSRSASPDYKSRRKGRYDDERHSRSPSRSVDSRSPARHSPSPRRSPSPKKSISPQRIASPRKSPRVESPDNHSRDGRRSASPHSVSPHGRPDSSRSPSPRNSNGDE* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0537 271 MobiDBLite consensus disorder prediction 98 115 - -
Lan2g0537 271 MobiDBLite consensus disorder prediction 194 223 - -
Lan2g0537 271 MobiDBLite consensus disorder prediction 228 246 - -
Lan2g0537 271 SUPERFAMILY RNA-binding domain, RBD 8 100 IPR035979 GO:0003676
Lan2g0537 271 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR SC35 1 271 - -
Lan2g0537 271 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 1 271 - -
Lan2g0537 271 SMART rrm1_1 17 90 IPR000504 GO:0003723
Lan2g0537 271 MobiDBLite consensus disorder prediction 98 271 - -
Lan2g0537 271 MobiDBLite consensus disorder prediction 127 193 - -
Lan2g0537 271 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 18 88 IPR000504 GO:0003723
Lan2g0537 271 Gene3D - 4 103 IPR012677 -
Lan2g0537 271 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 16 94 IPR000504 GO:0003723
Lan2g0537 271 MobiDBLite consensus disorder prediction 251 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0537 Lan-Chr2 7252386 7255576 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0537 13 92 Eukaryotic Initiation Factors Gene Family AT3G11400 33.750 5.75e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0537 K12891 - gmx:100778928 323.553