Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0503 ATGTTATGCAGCAGTTGTATAAGGTCTTTGGTTGTTCAAGCTGGAACCTACGCCAAAAGATTGGAAACCAACAGCATTGGAGGGAGGAGTCTGCAACAAGTTTCCAGAATTTCTTATTGGCGTAATCGTGAATTTAAGAAAATTATTGGGATGATGGTTGATACGGGGTCTATGTCATCAAGGGATGGACCCCTTGTTGATAATATGATGGCAGAGAAATATGATGAGGGTCGGTTTGCCAGTGGAGGATGGAAAAGCGAGGATGGAAGACTTGACTGTGGATATTCGAGTTTTCAGGGTAAGAGAGTGACAATGGAAGATTTTTATGATACCAAGGCATTAAGCATTGGTGGTCGATCGATATGCTTATTTGGAATATTTGATGGTCATGGAGGTTCTCGTGCTGCTGAGTATTTGAAAGACCATCTCTTTGATAATCTCATGAAGCATCCACAGTTTTTGACAGATGCCAAATTTGCTATTAGTGAAACATATCAACAGACTGATGCTGATTTTCTGAATGTTGAGAAGGAAACATTCCGGGATGATGGGTCCACGGCTTCAACAGCAGTTTTGGTTGATAACCATCTTTATGTAGCTAATGTTGGAGACTCTAGAACTATAATATCGAAAGCTGGCAAAGCAATTGCTCTATCTGAGGATCATAAACCAAATAGAAGTGATGAGCGGAAGAGAATTGAGAATGCTGGGGGTGTTGTCATGTGGGCAGGTACATGGAGGGTAGGAGGGGTGCTAGCAATGTCTCGTGCCTTCGGCAATCGCATGTTGAAGCCATTTGTTGTAGCCGAACCTGAGATCCAGGACCAAGAAATAGATGAACAAATTGAGCTGCTTATTCTTGCCAGTGATGGACTCTGGGACGTGATACAAAATGAGGATGCTGTTTCTCTTGCCCGCACTGAAGAGGAGCCTGAGGCAGCTGCTCGAAAGTTAACAGAAGCTGCATTTTCTCGTGGCAGTGCCGATAACATTACATGCATTGTGGTGCGCTTCCACCATGACAAAGCCGACCCGATTAATCCTGACAAAGCAGAATCAGCTAGTGTCGAGCCTGAGTCGACAACATGA 1089 0.4389 MLCSSCIRSLVVQAGTYAKRLETNSIGGRSLQQVSRISYWRNREFKKIIGMMVDTGSMSSRDGPLVDNMMAEKYDEGRFASGGWKSEDGRLDCGYSSFQGKRVTMEDFYDTKALSIGGRSICLFGIFDGHGGSRAAEYLKDHLFDNLMKHPQFLTDAKFAISETYQQTDADFLNVEKETFRDDGSTASTAVLVDNHLYVANVGDSRTIISKAGKAIALSEDHKPNRSDERKRIENAGGVVMWAGTWRVGGVLAMSRAFGNRMLKPFVVAEPEIQDQEIDEQIELLILASDGLWDVIQNEDAVSLARTEEEPEAAARKLTEAAFSRGSADNITCIVVRFHHDKADPINPDKAESASVEPESTT* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0503 362 CDD PP2Cc 93 338 IPR001932 -
Lan2g0503 362 Pfam Protein phosphatase 2C 92 331 IPR001932 -
Lan2g0503 362 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 54 346 - -
Lan2g0503 362 SMART PP2C_SIG_2 90 338 IPR001932 -
Lan2g0503 362 PANTHER ALPHABET, ISOFORM E-RELATED 54 346 - -
Lan2g0503 362 SMART PP2C_4 82 336 IPR001932 -
Lan2g0503 362 Gene3D - 83 360 IPR036457 -
Lan2g0503 362 ProSiteProfiles PPM-type phosphatase domain profile. 92 338 IPR001932 -
Lan2g0503 362 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Lan2g0503 362 SUPERFAMILY PP2C-like 89 339 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0503 Lan-Chr2 6182266 6189786 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0503 1 359 PP2C-type Phosphatase Gene Family AT5G53140 66.757 7.25e-174 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0503 K17506 - gmx:100805795 576.63