Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0502 ATGAATAATTCAAAACGACACTCACCACATGCCACAGCTCTGCGACGAAACGACGCCGTTTCAAACGAGACAGTTACAAGGTTCAAGAATTCTCGCCGGAGAAGGGTACAAATCCGGGAAAGGAAGTATACTTGTGAGGCGAAGCTCCATGCTCCGATGAAAACGAGGTCTGTGGAATCAGTGGAGATATCGCTTTTGGTGGCAATGGCATCGACGTTGTCATCGGAGAAGGAGGATCGGTGGTTGAAGCGAAACGATGAAGTTCTATCGTACGGTACGATGTCGGTGACGGGGAATAGGAAGGAGATGGAGGATGCAGTGAGCGTGGAGATAGGGTTTGTGTCGAAGGAGAGAAGAAATTGTGATTTCTTCGCGGTTTACGACGGTCACGGTGGAGCTCAGGTGGCGGAAGTGTGCCGGGAGCGGTTGCACCGGTTGGTGGCGGAGGGAGTGGAGAGGTATGGTAGAAGGAGTGGGAATGAGGTGGAATGGGACTGGGAGGATGTGATGGAAGGGTGTTTTGGTAAAATGGATAGAGAGGTAGGGGATGTTGAAGCAGTGAGGACGGTAGGGACGACGGCGATTGTGGCGGTTGTAGCGGAGGAGGAAATTGTGGTGGCTAATTGCGGTGATTCCAGAGCAGTGATGGGAAGAGGTGGTGAAGCTTTGGACTTATCTTGTGATCATAAGCCAGACAGGCCTGATGAGTTGATGCGAATAGAAGAGGCTGGTGGAAGGGTCATAAACTGGAATGGACATCGTGTTCTTGGTGTTCTTGCCACTTCACGATCTATAGGAGACCAGTACCTTCAACCATATGTAATATCGAAACCAGAAGTCACAGTGACCAAGAGAACCAGTAAGGACGAATTTCTTATACTAGCAAGTGATGGCTTGTGGGATGTCATCTCTAGCGATTTTGCGTGTAAGGTTGTAAGGAAATGTCTCAACAGCCAGAGTAGGCAAGTTTCCGATGGGGTAGGGAATCAAAGCCGTGCTGCCAAGGCCGCAGCCCTCTTGGTTAAGATAGCATTGGCAAAGGGAAGCAGAGATAACACCAGTGTCATAGTAATAGAGCTGAGAGGAACAACAACAACCTCTAGTTAA 1107 0.495 MNNSKRHSPHATALRRNDAVSNETVTRFKNSRRRRVQIRERKYTCEAKLHAPMKTRSVESVEISLLVAMASTLSSEKEDRWLKRNDEVLSYGTMSVTGNRKEMEDAVSVEIGFVSKERRNCDFFAVYDGHGGAQVAEVCRERLHRLVAEGVERYGRRSGNEVEWDWEDVMEGCFGKMDREVGDVEAVRTVGTTAIVAVVAEEEIVVANCGDSRAVMGRGGEALDLSCDHKPDRPDELMRIEEAGGRVINWNGHRVLGVLATSRSIGDQYLQPYVISKPEVTVTKRTSKDEFLILASDGLWDVISSDFACKVVRKCLNSQSRQVSDGVGNQSRAAKAAALLVKIALAKGSRDNTSVIVIELRGTTTTSS* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0502 368 PANTHER PROTEIN PHOSPHATASE 2C 51-RELATED 32 363 - -
Lan2g0502 368 Gene3D - 82 366 IPR036457 -
Lan2g0502 368 PANTHER ALPHABET, ISOFORM E-RELATED 32 363 - -
Lan2g0502 368 MobiDBLite consensus disorder prediction 1 20 - -
Lan2g0502 368 SMART PP2C_SIG_2 104 360 IPR001932 -
Lan2g0502 368 CDD PP2Cc 90 360 IPR001932 -
Lan2g0502 368 SMART PP2C_4 78 358 IPR001932 -
Lan2g0502 368 Pfam Protein phosphatase 2C 91 353 IPR001932 -
Lan2g0502 368 ProSiteProfiles PPM-type phosphatase domain profile. 90 360 IPR001932 -
Lan2g0502 368 ProSitePatterns PPM-type phosphatase domain signature. 123 131 IPR000222 GO:0043169
Lan2g0502 368 SUPERFAMILY PP2C-like 87 362 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0502 Lan-Chr2 6169582 6173203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0502 82 361 PP2C-type Phosphatase Gene Family AT1G07430 45.946 3.11e-88 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0502 K14497 - gmx:100807235 447.973