Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0492 ATGAGTACTGGTTGGAGAAGAGCTTTTTGCACTAGGGATCCAGAATCAAGTTTATCAGATAACAAAGAACAACCCATTAGCCCCAACCCCAGAAGCTGTGGTAGATTGAATTTCTTTTCCAACCCTTCCACTCCAAGGTTACATCAATCTCAATCTCAATCTCAATCTCCAAGCTTACGTTGCAGAACAATTGCAGAAGCTGCTCAAGCAGCTATAAAAAATGAAAGCCCCAGAATTCAGAACAAAACCACTCCAAGATCATTCAATTCCCCAAAAACTCTTTCCACCTCAAATCCTTCCTCTCATCGCACCCCTTTGAAGCTCTCCCTCTTCAAAAACAGCTTCAAATTCCGGAGTAACTGTGGAATCTGTTTGAACAGTGTGAAGACGGGGAAAGGCACAGCGATTTACACTGCAGAATGTTCACACGCTTTTCATTTTCCTTGCATAGCTTCACATGTTCGAAACCATGGTAGTCTCGTATGCCCTGTTTGCAACGCTACTTGGAAAGACGTGCCATTACTGGTTGCTCACAAGAACGAAAACGACGTCGTTTCAATTGAGAAAACGAGAATAGAGAGTTCTTCCTCCGTTTCAAAAACCAATCACGTTCAGCCACCGCAACAAAAGCATGTTTCCGATTCCGTTAGGTCTTATGATGATGATGAACCTCTTTTATCTCCTAGATTTGTTCCGATTCCCGAAGCTGATGAAAACGGCGATGAAGCACAACAACAAAACGACGACGTTGAGTTCCAGGGCTTTTTCGTTGATCCAAAACCTTCATCCTCGGTTAAATCTTACTCCGATGAGCAACAAATCAACAACGGAGATTCCAGAACCGTAGAAGTGAAGTTAATGCCAGAGTGTGCAATCGTATCAGTTTCCCGAAGCTACGAATCATACGCTCTGGTTCTGAAAGTAAAAGCTCCTCCTCCACCACCGCCACCTCCGATTCGTAGCGGCGGTGCTCCGGTTCTGGATCCTTCACAGCGCGCACCGATAGATCTGGTTACAGTTTTAGGAATCGGTGGAAGCATGACAGGTGTGAAGCTTGAAATGCTGAAACGCTCGATGCGTTTGGTTATCTCTTCTCTTGGCTCATGTGATAGACTCTCCATTGTAGCTTTCTCAGCGATACCAAAACGGTTACTACCATTGCGGAGAATGACACCTCAAGGTCAACGCATGGCTCGGCGAATCGTTGACCGGTTAGTCTCCGTCGCCGGAAACGGAACCACCAGCGTCGGCGATGCGTTGAGAAAAGCCACCAAAGTGTTAGAGGATAGAAGAGAGAGAAACCCGGTCGCTAGTGTGATGTTGTTATCCGACGGTCAAGATGAAAGGGTACAAACTAGTACCAAATCAAATCAACGGAAGAATATGAGCCACGTGTCATCAACACGGTTCGCTCATATCGAGATTCCGGTTCAATCATTCGGGTTCGGAAGAACCGAAACCGGTGAAGAAGATGCTTTTGCTAAGTGTGTGGGTGGTATATTAAGCGTAGTGGTTCAAGACTTGAGAATTCAGCTTGGGTTTCAAACCGATTCCGGTGAGTTAATTGCAGTTTACTCGTGCAATGGGAGACCTACATTGTTGAGTTCGAGAGCTGTTCGACTCGGCGATTTATACGCTGAGGAAGAGAGAGATTTATTGATTGAGCTAAGAGTTCCATTGTCGTCTTTTGAAAATGGGACCCACCACGCGATGAAGCTAAGATATTGTTTCAAAGATCCTGCTACACAAGAAATTGTATATGGTAAGGAACAAAGTCTTATAGTGCCGCCACCTCAGAGTAACCGTTCTAATAGAATCGAGAGACTAAGGAATCTATTTATAGCGACTCGAGCCATTGCTGAGTCGAGGAGGCTTATGGAGCATAATGGGGATTTAAATAGTGCTCATCATTTGTTGGCTTCTGCTCGAGCCCTTTTGGTTCAATCCGGTTCGGGTTTGGATTCGGATTCGAGTATAGAGTATGTACGCAGATTGGAGGCTGAGCTGGCGCAAGTTGAATGGAGGAGGCAAAATCAGGCGGAGAAGGAAAATGTGCAAAAAGAGAGGGAGGTGGCTGCATTGGAGGATGAGAATGGAGAGCCGTTAACTCCGACATCGGCTTGGAGAGCGGCTGAGAAGCTGGCTAAGATGGCTATGATTAAGAAGTCTTTGAATAGAGTTAGTGACTTGCATGGATTTGAAAATGCTAGGTTTTAA 2217 0.4538 MSTGWRRAFCTRDPESSLSDNKEQPISPNPRSCGRLNFFSNPSTPRLHQSQSQSQSPSLRCRTIAEAAQAAIKNESPRIQNKTTPRSFNSPKTLSTSNPSSHRTPLKLSLFKNSFKFRSNCGICLNSVKTGKGTAIYTAECSHAFHFPCIASHVRNHGSLVCPVCNATWKDVPLLVAHKNENDVVSIEKTRIESSSSVSKTNHVQPPQQKHVSDSVRSYDDDEPLLSPRFVPIPEADENGDEAQQQNDDVEFQGFFVDPKPSSSVKSYSDEQQINNGDSRTVEVKLMPECAIVSVSRSYESYALVLKVKAPPPPPPPPIRSGGAPVLDPSQRAPIDLVTVLGIGGSMTGVKLEMLKRSMRLVISSLGSCDRLSIVAFSAIPKRLLPLRRMTPQGQRMARRIVDRLVSVAGNGTTSVGDALRKATKVLEDRRERNPVASVMLLSDGQDERVQTSTKSNQRKNMSHVSSTRFAHIEIPVQSFGFGRTETGEEDAFAKCVGGILSVVVQDLRIQLGFQTDSGELIAVYSCNGRPTLLSSRAVRLGDLYAEEERDLLIELRVPLSSFENGTHHAMKLRYCFKDPATQEIVYGKEQSLIVPPPQSNRSNRIERLRNLFIATRAIAESRRLMEHNGDLNSAHHLLASARALLVQSGSGLDSDSSIEYVRRLEAELAQVEWRRQNQAEKENVQKEREVAALEDENGEPLTPTSAWRAAEKLAKMAMIKKSLNRVSDLHGFENARF* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0492 738 MobiDBLite consensus disorder prediction 72 103 - -
Lan2g0492 738 SUPERFAMILY vWA-like 334 511 IPR036465 -
Lan2g0492 738 MobiDBLite consensus disorder prediction 191 213 - -
Lan2g0492 738 MobiDBLite consensus disorder prediction 191 245 - -
Lan2g0492 738 Pfam von Willebrand factor type A domain 336 451 IPR002035 -
Lan2g0492 738 SMART ring_2 121 165 IPR001841 -
Lan2g0492 738 MobiDBLite consensus disorder prediction 1 60 - -
Lan2g0492 738 SUPERFAMILY RING/U-box 114 171 - -
Lan2g0492 738 CDD RING-H2 121 166 - -
Lan2g0492 738 Gene3D von Willebrand factor, type A domain 337 510 IPR036465 -
Lan2g0492 738 Pfam RING-like zinc finger 120 150 IPR001841 -
Lan2g0492 738 ProSiteProfiles Zinc finger RING-type profile. 121 166 IPR001841 -
Lan2g0492 738 ProSiteProfiles VWFA domain profile. 336 483 IPR002035 -
Lan2g0492 738 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 3 738 - -
Lan2g0492 738 PANTHER E3 UBIQUITIN-PROTEIN LIGASE WAV3 3 738 - -
Lan2g0492 738 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 116 220 IPR013083 -
Lan2g0492 738 MobiDBLite consensus disorder prediction 74 103 - -
Lan2g0492 738 MobiDBLite consensus disorder prediction 20 60 - -
Lan2g0492 738 Coils Coil 662 697 - -
Lan2g0492 738 SMART VWA_4 334 520 IPR002035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0492 Lan-Chr2 5820177 5823142 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0492 88 202 C3H Transcription Factor Family AT5G17600 27.049 4.28e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0492 - - lja:Lj3g3v3131860.1 955.666