Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0489 ATGATGGCTGGGAACCCTAATTGGTGGAATATGAATCCACCATCTATGATTCCTCCCCAATATGTGCATGAATCTTCTTCAATTCCTTCAAATTCTTTGAGAGAAAATCCAGAACAACCTCAGCCATGGGACCAACTTCATTTCATTGGATTACCTGAAGAAGAGAGAGTGAGGTTCAGTCATTTTCAATCAAGAGATCATAATGTTGATTTAATAAAACAAGAGGGTTCCCAAAGTGTCAACTTCTATAGCCATGATGGTCATCATAATGAAGAATTTCTTCAGGATTCTGGAGCTGGGTCATGTTGGTCACATATGGTGCAAGTTTCAAATAATTCCCCTAACTTAAATGTCACTACTAATTTGAGTAGTAATAATTTATTGGATTTCACTTATAACAAGGTTGATCATAGGCATAACCAGCTGGAGAATCACACATCTCAGTGTATTAGCACAGCTACTGCTGTATCTTGTAAGAAGGTTAAGGGTCAACCATCTTCAAGCCACCCCCCTCTAAAGGTGAGAAAGGAGAAGCTAGGTGATAGAGTAACAGCACTTCACCAAATAGTTTCTCCATTTGGAAAGACTGATACAGCTTCTGTGTTGTTAGAAGCCATTGGATATATCAGATTCTTGCAGGGTCAAATTGAGGCACTAAGTTCTCCATATTTGGGCAATGTATCAAAAAACATAAGGAATCAATCAGTGATGAGTGACATTGGCTTGAAAAGAAAGGGAGCTCCAAACCAGGATGCAAAAGATAAGGCAACAGATTTGAAGAGTAGAGGGTTGTGTTTGGTTCCTGTTTCTTGCACCCAACATGTTGGATGTGAAAATGAAGCTGATTTTTGGGCACCTGCATATGGCAGTGGATTTTAA 879 0.3925 MMAGNPNWWNMNPPSMIPPQYVHESSSIPSNSLRENPEQPQPWDQLHFIGLPEEERVRFSHFQSRDHNVDLIKQEGSQSVNFYSHDGHHNEEFLQDSGAGSCWSHMVQVSNNSPNLNVTTNLSSNNLLDFTYNKVDHRHNQLENHTSQCISTATAVSCKKVKGQPSSSHPPLKVRKEKLGDRVTALHQIVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNVSKNIRNQSVMSDIGLKRKGAPNQDAKDKATDLKSRGLCLVPVSCTQHVGCENEADFWAPAYGSGF* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0489 292 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 8 279 - -
Lan2g0489 292 MobiDBLite consensus disorder prediction 20 41 - -
Lan2g0489 292 PANTHER BHLH TRANSCRIPTION FACTOR-LIKE PROTEIN 8 279 - -
Lan2g0489 292 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 223 IPR036638 GO:0046983
Lan2g0489 292 Gene3D - 173 235 IPR036638 GO:0046983
Lan2g0489 292 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 163 212 IPR011598 GO:0046983
Lan2g0489 292 MobiDBLite consensus disorder prediction 20 39 - -
Lan2g0489 292 CDD bHLH_AtbHLH_like 173 220 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0489 Lan-Chr2 5762594 5767139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0489 138 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 46.012 2.62e-32 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0489 - - gmx:100802121 368.237