Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0487 ATGCATTGGAAAAGGCTTATGTTGAAATCCATAATACTTGGTTGTTTCAAGGCTAAGCACCAATCCTTAGACCAAAACATAGTTTCAAAAAAGACATGTTCAAGGAGAGTCTCTCTCTCTGATTTGAGCAATGCTTCAGCAGTATCTATAATGAGTGATTTATCCAATTCTCTTATAGGATCAAATCTTCAAATTTTCACATACCATGAGCTGAAAGAGATTACACAAAACTTTAGCAAATCCAACTTACTTGGAGAAGGTGGATTTGGAAAGGTATATAAAGGGTTCATTGATGAGAAGCTTAGGCCATGTTTGGAAGCTCAAGCTGTAGCAGTGAAAGCTTTAAACTTGGATGGAAAACAAGGCCATAGAGAGTGGTTGACTGAAGTAGTCATTCTGGGGCAATTGAAGCATCGCCATCTAGTAAATTTAATTGGATATTGCTGTGAAGATGAGTACAGGCTTCTTGTTTACCAATATATGGAGAGGGGCAATTTAGAGGAAAAACTTTTCAAAGGTTATTTAGCAGCCTTACCTTGGTTAACAAGAATCAAAATAGCAATTGGTGCTGCAAAGGGACTTGCTTTCCTTCATGAAGAAGAGAAACCAGTCATATATAGAGATGTTAAAGCATCAAACATTCTATTAGATGCTGATTACAATGCCAAGCTCTCAGATTTTGGTTTAGCAATAGATGGACCAGAAGAAGATGGAACGCATATTACAACTCGTGTGATGGGAACTCGTGGTTATGCTGCTCCTGAGTATATAAACACAGGTCATTTGACAACCATGAGCGATGTATATAGTTTTGGAGTTGTTCTGTTAGAGTTACTGACAGGGAAGAAAACGGTGGACAAGAAAAGACCAACTAGAGAGCAAGACTTAGTAAAATGGGCAAGGCCTATGTTAAAGGATTCTCATAAACTTGAAAGCATAATGGACCCAAGACTTGAGGGTCAGTACTCTTATCAAGGGGCTAAGAAAATAGCATCATTGGCTTACCAATGTCTAAGCCAACATGCAAAGCTTAGGCCAACAATGCTAAATGTGGTGAAGACTTTAGAGCCTCTAATGGATTTGAATGATATTCCTATTGGTAATTTTGTTTATGTGGTTCCAAATGAAGGAGTCAATGAAGGCTCACTTAAGTTGAATAATGACAAAGATGAAGAAAAGTGTGAGAGAAAAGAGAAGGGTCATCAAAGACAAAGAAAAGGTCATGGCCTTAAACATAGGTCATCACGTGCTGTTTACTCTGACAGTGCTCTATATAAGATTCTTGGAACCAGTTTGTACTCTCCAAAACAACTACCAGAAACACATGAACATGCATGA 1338 0.3804 MHWKRLMLKSIILGCFKAKHQSLDQNIVSKKTCSRRVSLSDLSNASAVSIMSDLSNSLIGSNLQIFTYHELKEITQNFSKSNLLGEGGFGKVYKGFIDEKLRPCLEAQAVAVKALNLDGKQGHREWLTEVVILGQLKHRHLVNLIGYCCEDEYRLLVYQYMERGNLEEKLFKGYLAALPWLTRIKIAIGAAKGLAFLHEEEKPVIYRDVKASNILLDADYNAKLSDFGLAIDGPEEDGTHITTRVMGTRGYAAPEYINTGHLTTMSDVYSFGVVLLELLTGKKTVDKKRPTREQDLVKWARPMLKDSHKLESIMDPRLEGQYSYQGAKKIASLAYQCLSQHAKLRPTMLNVVKTLEPLMDLNDIPIGNFVYVVPNEGVNEGSLKLNNDKDEEKCERKEKGHQRQRKGHGLKHRSSRAVYSDSALYKILGTSLYSPKQLPETHEHA* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0487 445 SUPERFAMILY Protein kinase-like (PK-like) 53 356 IPR011009 -
Lan2g0487 445 PANTHER BNAA02G16030D PROTEIN 26 411 - -
Lan2g0487 445 ProSitePatterns Protein kinases ATP-binding region signature. 84 113 IPR017441 GO:0005524
Lan2g0487 445 Gene3D Transferase(Phosphotransferase) domain 1 161 365 - -
Lan2g0487 445 CDD STKc_IRAK 84 358 - -
Lan2g0487 445 PANTHER OS01G0588500 PROTEIN-RELATED 26 411 - -
Lan2g0487 445 SMART serkin_6 78 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0487 445 Gene3D Phosphorylase Kinase; domain 1 49 160 - -
Lan2g0487 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Lan2g0487 445 MobiDBLite consensus disorder prediction 383 399 - -
Lan2g0487 445 ProSiteProfiles Protein kinase domain profile. 78 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0487 445 MobiDBLite consensus disorder prediction 380 416 - -
Lan2g0487 445 Pfam Protein tyrosine and serine/threonine kinase 81 355 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0487 Lan-Chr2 5717869 5720606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0487 64 384 Glycoside Hydrolase AT3G07070 48.765 5.48e-102 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan2g0487 PK_Tyr_Ser-Thr 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0487 - - gmx:100790454 662.144