Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0458 ATGTTGAATTGCATAGCATGTTCTAAGCAGCTTAATAGTAATGGATCTCTTCACCAACAAGAAGATGAAGAAGCTGTGCATACACCAAGCACTAAGCATGCCATTAAGGCTCTTACTTCTCAAATCAAGGACATGGCAGTGAAGGCTTCAGGGGCTTATAAAAATTGTAAGCCTTGTTCAGGATCTTCCAACAGTAACCGGAATAGAAACTATGCTGACTCCGATATCGGCTCGGATTCAGCGAGGTTCAATTTGGCGTACCGCAGACCAGGAAGCTCCAATTCAACCCCGAGGATGTGGGGGAAGAAAGTGGAAGCTAGACTGAAAGGGCTTTCCAGTGGGGAAGTAACACCGACATCGGTGAGTGGAAGAACTGAGTCAGTGATGTTCACAGAGGAGGATGAGCCAAAGGAATGGATTGCACAAGTGGAACCTGGTGTGCTTATTACATTTGTTTCTTTGCCTCAGGGTGGCAATGATCTGAAGAGGATAAGATTCAGTCGTGAAATGTTTAATAAATGGCAAGCTCAGAGGTGGTGGGCAGAGAATTATGACAAGGTCATGGAATTGTACAATGTTCAAAGATTCAATCAAGAAGCTGTTCCCTTTCCAACCCCACCTAGATCCGAAGACGAGAGTTCAAAGATTGAATCTGTGAGGGATGGTCCTGTCACTCCTCCTCTCAGCATAGAGCGTGCACCGCGCCATCTTCACTACCAAGCAATGGGGACGGGCTACTCCTCATCAGACTCACCGGATCACCACCAAACGAAACCTCAACCTTGTTATCAAACAAGCGGTTTAGCCTCAACACCTAATCTCTCCAACATTAGGGGGCAAAAGACTGAGAGATCATCAATTGATGGTTCTGCAAGGACTAGTTCATCAAGAGAGGAAGATCGATCAAGTGAGCTTTCTATCAGCAATGCTAGTGATATGGAAACTGAATGGGTCGAACAAGATGAACCAGGAGTGTACATAACTATCAGGTTACTGCCAGGTGGAGCCAGAGAACTTAGGCGTGTCCGGTTCAGCCGAGAAAAGTTTGGAGAAATGCATGCCAGACTATGGTGGGAAGAGAACCGTGCTAGGATACAAGAGCAGTACTTATGA 1113 0.46 MLNCIACSKQLNSNGSLHQQEDEEAVHTPSTKHAIKALTSQIKDMAVKASGAYKNCKPCSGSSNSNRNRNYADSDIGSDSARFNLAYRRPGSSNSTPRMWGKKVEARLKGLSSGEVTPTSVSGRTESVMFTEEDEPKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNQEAVPFPTPPRSEDESSKIESVRDGPVTPPLSIERAPRHLHYQAMGTGYSSSDSPDHHQTKPQPCYQTSGLASTPNLSNIRGQKTERSSIDGSARTSSSREEDRSSELSISNASDMETEWVEQDEPGVYITIRLLPGGARELRRVRFSREKFGEMHARLWWEENRARIQEQYL* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0458 370 ProSiteProfiles BRX domain profile. 137 192 IPR013591 -
Lan2g0458 370 MobiDBLite consensus disorder prediction 242 292 - -
Lan2g0458 370 Pfam Transcription factor BRX N-terminal domain 23 59 IPR027988 -
Lan2g0458 370 ProSiteProfiles BRX domain profile. 315 370 IPR013591 -
Lan2g0458 370 MobiDBLite consensus disorder prediction 200 316 - -
Lan2g0458 370 Pfam Transcription factor regulating root and shoot growth via Pin3 314 369 IPR013591 -
Lan2g0458 370 Pfam Transcription factor regulating root and shoot growth via Pin3 137 191 IPR013591 -
Lan2g0458 370 PANTHER PROTEIN BREVIS RADIX-LIKE 3 1 370 - -
Lan2g0458 370 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 370 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0458 Lan-Chr2 5084818 5088331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0458 1 370 Major Intrinsic Protein MIP AT1G31880 45.619 7.60e-100 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0458 - - gmx:100805480 619.387