Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0450 ATGAAGAAAGAAAACAGTGTTGTGTTGAAAGCTGGAGAGTTCCCTGGTCGAATGACTCGTGCTCAGGTTGCTTCTTCTCGTGTGTCTAGACAGCTTGCCCCTTTGAAGGAGCCATCACGACGAAATCAGAACCAGCCACTATGTGCCAATCCCAAAAGAGCAGTTTCCGATTCTGGTAGTACATGTCTTCAACATAAAAAGAGGGTTGTTCTTGAGGATGTTACCAATGTTTGCTGTCAAAATTCATACAAGAGCTGTTTCGATTCGACGATAATTCAGGCTAAGAAAAGAAAGGTGGTTAAGGCTAGTCGAACTAATGTTGCGAAAGCGGCTCCTTCTGTTGCTGTGGAGCTACCACAACTTCAATCCAAATCAGAAGATGCTATCTGTTCAACTAATTTGGAAAACAATTCCTTTCTAAAGCTGAGCTCCAATAAGTGTGGCAAAGATGATAGTACTTCTGGAACATCTGCTCAGCCTACAGATTCTAAGAAAAAAGCCAAGAAAGGTAACTTTTATGAACTTTTGATAGCATCAAAGGGTCCAGTCATCACTGACATTGATGATAATTTTGAAGATCCTCAACTATGCAGCCACTATGTCACTGATATCTATAACAACCTGCGTGTTGCCGAGCTTGCGAGAAGGCCACATCCTAATTCCATGGAAACAGTGCAGCAAGATATCACTCAAAGCATGCGTGGAATACTGATTGATTGGCTTGTGGAGGTTTCCGAGGAATACAAATTGGGACAAGACACTCTTTACCTCACTGCATATCTCATTGATTGGTTTCTCTCCAAAAGTTATGTTGAAAGACAAAGACTTCAGCTGCTTGGAATCACATGCATGCTCATTGCATCGAAGTACGAAGAAATTAATGCTCCTCACATTGAAGATTTCTGCTTCATCACAGACAACACATACACAAAAGCTGAGGTATTAAGAATGGAGAATCAAGTGTTAAAGTTGTCTGAATATAAACTGTTTGCTCCCACTACAATAACTTTCCTCAGGAGGTTTCTTCGGGCAGCACAAGCATCTGACAAGAGTCCTAGCCTTGAATTGGAGTACCTAGCCAGTTACTTAGCTGAACTGACACTGATGGACTATGATTTCTTGAATTTCCTTCCTTCTATAATTGCTGCATCAGTTGTATTTCTTGCCAAATGGACATTAGATCAGTCAAACCATCCATGGGATCCTACCCTTGAACACTATGCACATTATAAAGCATCAGATTTGAAAACCGCAGTTTTTGCATTGCAAGACCTACAGCTGAATACCAATGGCTGCCCTCTAAATGCTGTCCGCTCAAAGTACAGACAAGAAAAGTTTAAATGTGTAGCAGATTTGTCTTCACCAAAACTGATTGAAACTTTGTTCTGA 1389 0.4096 MKKENSVVLKAGEFPGRMTRAQVASSRVSRQLAPLKEPSRRNQNQPLCANPKRAVSDSGSTCLQHKKRVVLEDVTNVCCQNSYKSCFDSTIIQAKKRKVVKASRTNVAKAAPSVAVELPQLQSKSEDAICSTNLENNSFLKLSSNKCGKDDSTSGTSAQPTDSKKKAKKGNFYELLIASKGPVITDIDDNFEDPQLCSHYVTDIYNNLRVAELARRPHPNSMETVQQDITQSMRGILIDWLVEVSEEYKLGQDTLYLTAYLIDWFLSKSYVERQRLQLLGITCMLIASKYEEINAPHIEDFCFITDNTYTKAEVLRMENQVLKLSEYKLFAPTTITFLRRFLRAAQASDKSPSLELEYLASYLAELTLMDYDFLNFLPSIIAASVVFLAKWTLDQSNHPWDPTLEHYAHYKASDLKTAVFALQDLQLNTNGCPLNAVRSKYRQEKFKCVADLSSPKLIETLF* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0450 462 MobiDBLite consensus disorder prediction 36 52 - -
Lan2g0450 462 SMART cyclin_7 336 424 IPR013763 -
Lan2g0450 462 SMART cyclin_7 239 323 IPR013763 -
Lan2g0450 462 Gene3D - 203 451 - -
Lan2g0450 462 MobiDBLite consensus disorder prediction 146 161 - -
Lan2g0450 462 Gene3D - 217 330 - -
Lan2g0450 462 PANTHER CYCLIN-A2-4 47 462 - -
Lan2g0450 462 SUPERFAMILY Cyclin-like 332 457 IPR036915 -
Lan2g0450 462 CDD CYCLIN 332 422 IPR013763 -
Lan2g0450 462 Pfam Cyclin, N-terminal domain 203 328 IPR006671 -
Lan2g0450 462 MobiDBLite consensus disorder prediction 20 52 - -
Lan2g0450 462 CDD CYCLIN 233 322 IPR013763 -
Lan2g0450 462 Pfam Cyclin, C-terminal domain 332 454 IPR004367 -
Lan2g0450 462 PIRSF Cyclin_A_B_D_E 15 461 IPR039361 -
Lan2g0450 462 SMART Cyclin_C_2 332 455 IPR004367 -
Lan2g0450 462 MobiDBLite consensus disorder prediction 146 165 - -
Lan2g0450 462 PANTHER CYCLINS 47 462 IPR039361 -
Lan2g0450 462 SUPERFAMILY Cyclin-like 192 326 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0450 Lan-Chr2 4901729 4908897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0450 1 462 Core Cell Cycle Gene Families AT1G80370 53.118 1.43e-161 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0450 K06627 - gmx:100793657 640.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0681 9 9989806 9996210 Lan2g0450 2 4901729 4908897 LSH