Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0447 ATGGTTTTGAACTCCAATAGAGTTGATCACTTTGTTTGTCATGGAACCACAACCACTATCAAAATCCAAACAGATATACCAATAATGCAACAAAGTACACCATTGGAAATACATAAAGTTAGGTTGCCACCACAACACACCACATTACACAAACTTAAACATAGCCTCTCTGAGATTTTCTTCCCTGATGACCCTTTATACACCTTCAAAAACCAAACTTGGTGCACCAAATTCTTTCTTGGTATTCAATACTTGTTCCCTATTTTTCAATGGGGTCCTCACTACAATCTTTTGCTTCTTCGCCATGATGTTATCTCTGGTCTCACCATTGCTAGCCTTGCCATTCCTCAGGGAATCAGTTATGCTAAGCTTGCAAACTTGCCACCCATTATTGGATTATATTCGAGCTTTGTGCCACCATTGATATATTCATTGTTAGGGAGTTCTAGACATCTTGGTGTTGGTCCAGTTTCAATTGCATCATTGGTTATGGGATCAATGTTAAGTGAAACAGTTTCTTATACTCAAGATCCAGTTCTATATCTTAAGCTAGCTCTCACTGCTACTTTCTTTGCTGGTGTATTTCAATCTTCTTTGGGTTTCTTAAGATTAGGCTTTGTTATTGATTTTCTGTCAAAGGCAACATTGGTGGGTTTCATGGCTGGTGCAGCCATTATAGTGTCACTTCAACAGCTGAAAGGTTTATTTGGAATAATGCATTTCACCAGCAAGATGCAAATAATACCTGTACTTTCCTCTGTTTTCATGCAAAGAGATGAGTGGTCATGGCAAACCATTCTAATTGGATTCAGCTTCCTAGCTTTCCTCCTAATAGCAAGGCACATTAGCTTGAGGAAACCAAACTTATTCTGGGTTTCAGCAGCTGCACCATTGACATCAGTTATTCTGTCAACAATTTTAGTCTTTCTTCTGAGAAATAAGGTTCACAAAATTGCAATTATTGGTGAATTGCCAAAGGGTGTTAATCCACCATCATCAAACATGCTATACTTCAATGGTCCTCATTTGGCTCTTGCTATCAAAACTGGACTTGTCACTGGAATCTTATCTCTCACTGAAGGAATTGCAGTAGGAAGAACATTTGCTGCACTTAAGAACTACCAAGTGGATGGCAACAAAGAAATGATGGCCATTGGTCTTATGAACATTGCTGGTTCTTGTTCTTCTTGTTATGTCACATCAGGATCCTTTTCTCGATCAGCCGTTAACTACAATGCAGGAGCACAGACAACAGTCTCTAATATAATCATGGCTTCAGCAGTGCTTGTGACCCTTTTGTTTCTCATGCCTCTATTCTACTACACACCAAATTTTGTCTTAGCATCCATTATCATCACTGCTGTGATTGGTTTAATAGATTATCAAGCTGCATATAAACTGTGGAAGGTTGATAAGCTTGATTGCTTGGCCTGCTTGTGCTCCTTTTTCGGTGTTCTATTCATTTCAGTGCCTTTAGGCCTTGGAATAGCAGTGGCGATATCAGTCATCAAGATCCTGCTTCATGTCTCTCGGCCTAACACACAGGTTTTGGGGAATATACCAGGGACGTTGATATTCCGCAACGTAAACCAATATAGAGAAGCTTTAAGGGTTCCTTCATTTCTCATTTTGGCTGTTGAATCTCCTATCTACTTTGCTAACTCAACTTACCTGCAAGAAAGGATACTGAGATGGGTTCGGGAAGAGGAAGAGCGTATAGAAGCAAACAAGGAAAATACATTGAAGTGCATAATTTTAGACATGACAGCTGTCACAGCCATAGACACAAATGGGATGGACACTGTAAGTGAACTTAGAAAGATGCTGGAAAAAAGATCACTTCAGTTTGTGTTGGCAAATCCTGTTGGAAATGTGATGGAAAAGTTACATCAAGCAAATATTTTGGATTCCTTTGGGTTGAAAGGAGTTTATCTCACAGTAGCAGAAGCTGTGGCTGACATTTCATCCTCCTTGAAACCACAACCTTGA 1989 0.3952 MVLNSNRVDHFVCHGTTTTIKIQTDIPIMQQSTPLEIHKVRLPPQHTTLHKLKHSLSEIFFPDDPLYTFKNQTWCTKFFLGIQYLFPIFQWGPHYNLLLLRHDVISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSETVSYTQDPVLYLKLALTATFFAGVFQSSLGFLRLGFVIDFLSKATLVGFMAGAAIIVSLQQLKGLFGIMHFTSKMQIIPVLSSVFMQRDEWSWQTILIGFSFLAFLLIARHISLRKPNLFWVSAAAPLTSVILSTILVFLLRNKVHKIAIIGELPKGVNPPSSNMLYFNGPHLALAIKTGLVTGILSLTEGIAVGRTFAALKNYQVDGNKEMMAIGLMNIAGSCSSCYVTSGSFSRSAVNYNAGAQTTVSNIIMASAVLVTLLFLMPLFYYTPNFVLASIIITAVIGLIDYQAAYKLWKVDKLDCLACLCSFFGVLFISVPLGLGIAVAISVIKILLHVSRPNTQVLGNIPGTLIFRNVNQYREALRVPSFLILAVESPIYFANSTYLQERILRWVREEEERIEANKENTLKCIILDMTAVTAIDTNGMDTVSELRKMLEKRSLQFVLANPVGNVMEKLHQANILDSFGLKGVYLTVAEAVADISSSLKPQP* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0447 662 SUPERFAMILY SpoIIaa-like 536 653 IPR036513 -
Lan2g0447 662 ProSitePatterns SLC26A transporters signature. 129 150 IPR018045 GO:0008271|GO:0008272
Lan2g0447 662 ProSiteProfiles STAS domain profile. 531 654 IPR002645 -
Lan2g0447 662 PANTHER SULFATE TRANSPORTER 24 662 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan2g0447 662 Pfam Sulfate permease family 100 479 IPR011547 GO:0016021
Lan2g0447 662 Pfam STAS domain 532 650 IPR002645 -
Lan2g0447 662 Gene3D STAS domain 511 656 IPR036513 -
Lan2g0447 662 TIGRFAM sulP: sulfate permease 87 650 IPR001902 GO:0015301|GO:0016020|GO:0055085
Lan2g0447 662 CDD STAS_SulP_like_sulfate_transporter 532 647 - -
Lan2g0447 662 PANTHER SLC26A/SULP TRANSPORTER-RELATED 24 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0447 Lan-Chr2 4839906 4846026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0447 14 659 Inorganic Solute Cotransporters AT3G15990 73.839 0.0 999
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0447 K17471 - gmx:100817604 1075.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0236 10 1502267 1507776 Lan2g0447 2 4839906 4846026 PCT
Lan3g0175 3 1136779 1141990 Lan2g0447 2 4839906 4846026 PCT
Lan2g0447 2 4839906 4846026 Lan10g0236 10 1502267 1507776 PCT
Lan2g0447 2 4839906 4846026 Lan3g0175 3 1136779 1141990 PCT