Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0444 ATGAGTGTGGTCGGTTTTGATTTCGGTAATGAAAGCTGTATTGTTGCGGTTGCAAGGCAGAGGGGGATTGATGTTGTGCTCAATGATGAGTCCAAGCGTGAAACACCTGCAATTGTATGCTTTGGTGATAAGCAACGCTTCATCGGCACTGCTGGGGCTGCGTCCACTATGATGAACCCCAAGAATTCCATCTCACAGATTAAGAGGCTAATTGGTAAACAATTTTCTGATCCTGAATTGCAGCGGGATATCAAGTCATTGCCCTTTCATGTCACCGAAGGCCCTGATGGATATCCGTTGATTCATGCACGCTACTTAGGTGAAGCTAAAGCATTTACCCCAATCCAAGTCTTTGGAATGATGTTGTCGAACCTTAAGGAAATAGCTGAGAAAAATCTCAATGCCGCCGTTGTTGATTGTTGCATTGGAATCCCAGTTTATTTTACTGATCTCGAGAGGAGGGCAGTCTTGGATGCTGCCACTATTGCTGGCTTGCACCCACTTCACCTGATTCATGAAACTACTGCAACTGCCTTGGCCTATGGGATTTATAAGACAGACCTTCCTGAAAATGATCCGCTAAATGTTGCCTTTGTTGACATTGGACATGCAAGCATGCAAGTGTGCATTGCTGGATTCAAAAAGGGGCAGCTGAAAATACTAGCTCATTCATATGATAGGTCTTTGGGAGGTAGAGATTTCGACGAGGTTTTGTTCCATCACTTTGCTGCAAAATTTAAGGAAGAGTACAAGATTGATGTTTTCCAGAATGCCAGGGCTTCTCTAAGGCTCAGGGCTGCTTGTGAGAAGCTGAAGAAGGTTCTTAGTGCAAATCCTGAGGCACCTCTGAACATTGAGTGTTTAATGGATGATAAGGATGTCAGGAGCTTCATTAAGCGTGATGACTTCGAGCAACTAAGTGTTCCAATTTTGGAACGTGTCAAAGGACCTTTGGAGAAGGCACTTGCTGATGCAGGCCTTACAGTTGAAAATGTACACATGGTTGAGGTGGTTGGTTCTGGTTCTCGTGTACCAGCTATAAACAAAATATTGACAGAGTTTTTCGGAAAGGAGCCTAGGCGAACAATGAATGCTAGTGAGTGTGTTTCTAGGGGTTGTGCCTTACAATGTGCAATCCTTAGCCCAACGTTTAAAGTACGAGAATTTCAGGTCAACGAAAGCTTTCCTTTCTCAATTTCTCTCTCATGGAAAGGTTCTGCTCCAGATGCACAAGATAGTGGACCAGATAGTCAGCTAAGTACCCTTGTTTTCCCCAAGGGCAATTCCATACCAAGTATCAAGGCTCTGACATTCTACAGGTCTGAAACATTTTCTGTTGATGTACAATATGGTGGTGATATGAGTGGGCTGCAAACACCGACTAAGATCAGCACATATACTATTGGTCCTTTCCAAAGTTCAAAAAGTGAAAGGGCAAAGATTAAGGTTAAAGTTCGTTTGAATTTGCATGGAATTGTGTCCCTTGACTCCGCAATTCTCTTGGAAGAGGAAGAAGTTGAAGTTCCAGTTTCCAAAGAATCAGCGGTAGAAAATACCAAGATGGACACTGATGATGCTCCTGCCACTGCTGCTCCTCCTCCAACCTCTAATGACAGTGATGTTAATATGCAAGATGCAAAGGGTAGTGCTGACACACCCGGGGTTGAAAATGTTACCTCTCAAACGGATTCTGAGACCAAGGTTCAGGCTCCAAAGAAAAAGGTTAAGAAAACAAACATTCCTGTAGCAGAGTTAGTTTATGGAGCAATGACATCTGTGGATGTCCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGTGTGATGGAAGAAACAAAAGACAAGAAAAATGCTGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATATGAAGAGTTTGTGACTGCTCCAGAGAAGGAAGGTTTTGTTGCCAAACTTCAGGAGGTGGAAGACTGGCTGTATGAGGATGGTGAAGATGAAACTAAAGGTGTATATGTTGCCAAACTTGAAGAACTAAAAAAGCAAGGTGATCCAGTTGAAGAGCGTTATAAAGAATATACGGAGAGAGGTACAGTGATTGATCAGTTTGTCTATTGTATTAATAGTTACAGAGAAGCTGCAGTGTCAAATGATCCCAAATTTGATCATATTGACATCAACGAGAAACAGAAGGTCTTAACTGAATGTGTTGAAGCTGAGAATTGGCTTAGGGAGAAGAAGCAGCAGCAGGATTCACTTCCAAAATATGCCAACCCTGTGCTCTTGTCAGCTGAAATAAGAAAGAAAGCTGAGGCTGTTGATAGGTTCTGTAAGCCGATTATGACGAAACCCAAGCCCGCCAAGCCAGCTACTCCACCAACACCAGCAACCCCACCACCTCAGGGGGATGCTAATGCCAACACTCATGAGAATGCCGGGGCCACCGGTGGTGAGGTCCCACCAGAGTCTTCTGAACCAATGGAGACTGATAAGTCAGACAACACAGGCTCTGCATAA 2517 0.4354 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGDKQRFIGTAGAASTMMNPKNSISQIKRLIGKQFSDPELQRDIKSLPFHVTEGPDGYPLIHARYLGEAKAFTPIQVFGMMLSNLKEIAEKNLNAAVVDCCIGIPVYFTDLERRAVLDAATIAGLHPLHLIHETTATALAYGIYKTDLPENDPLNVAFVDIGHASMQVCIAGFKKGQLKILAHSYDRSLGGRDFDEVLFHHFAAKFKEEYKIDVFQNARASLRLRAACEKLKKVLSANPEAPLNIECLMDDKDVRSFIKRDDFEQLSVPILERVKGPLEKALADAGLTVENVHMVEVVGSGSRVPAINKILTEFFGKEPRRTMNASECVSRGCALQCAILSPTFKVREFQVNESFPFSISLSWKGSAPDAQDSGPDSQLSTLVFPKGNSIPSIKALTFYRSETFSVDVQYGGDMSGLQTPTKISTYTIGPFQSSKSERAKIKVKVRLNLHGIVSLDSAILLEEEEVEVPVSKESAVENTKMDTDDAPATAAPPPTSNDSDVNMQDAKGSADTPGVENVTSQTDSETKVQAPKKKVKKTNIPVAELVYGAMTSVDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYEEFVTAPEKEGFVAKLQEVEDWLYEDGEDETKGVYVAKLEELKKQGDPVEERYKEYTERGTVIDQFVYCINSYREAAVSNDPKFDHIDINEKQKVLTECVEAENWLREKKQQQDSLPKYANPVLLSAEIRKKAEAVDRFCKPIMTKPKPAKPATPPTPATPPPQGDANANTHENAGATGGEVPPESSEPMETDKSDNTGSA* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0444 838 MobiDBLite consensus disorder prediction 777 838 - -
Lan2g0444 838 Gene3D - 590 700 IPR029048 -
Lan2g0444 838 MobiDBLite consensus disorder prediction 530 546 - -
Lan2g0444 838 CDD HSPA4_like_NDB 2 381 - -
Lan2g0444 838 MobiDBLite consensus disorder prediction 785 800 - -
Lan2g0444 838 Gene3D - 5 374 - -
Lan2g0444 838 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 623 IPR029047 -
Lan2g0444 838 Coils Coil 676 696 - -
Lan2g0444 838 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 708 790 IPR029048 -
Lan2g0444 838 PRINTS 70kDa heat shock protein signature 2 15 - -
Lan2g0444 838 PRINTS 70kDa heat shock protein signature 30 42 - -
Lan2g0444 838 PRINTS 70kDa heat shock protein signature 140 160 - -
Lan2g0444 838 PRINTS 70kDa heat shock protein signature 332 348 - -
Lan2g0444 838 PRINTS 70kDa heat shock protein signature 363 383 - -
Lan2g0444 838 Gene3D Actin; Chain A, domain 4 230 313 - -
Lan2g0444 838 PANTHER HSC70CB, ISOFORM G-RELATED 1 837 - -
Lan2g0444 838 Gene3D - 38 113 - -
Lan2g0444 838 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Lan2g0444 838 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Lan2g0444 838 MobiDBLite consensus disorder prediction 510 572 - -
Lan2g0444 838 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 587 IPR029047 -
Lan2g0444 838 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 837 - -
Lan2g0444 838 Pfam Hsp70 protein 3 691 IPR013126 GO:0005524|GO:0140662
Lan2g0444 838 Gene3D - 186 360 - -
Lan2g0444 838 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 592 690 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0444 Lan-Chr2 4821993 4827666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0444 4 660 Calmodulin-binding Proteins AT1G16030 29.955 7.35e-90 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0444 K09489 - gmx:100778196 1365.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0568 5 11347295 11352848 Lan2g0444 2 4821993 4827666 LSH
Lan9g0688 9 10052724 10062652 Lan2g0444 2 4821993 4827666 LSH
Lan10g0241 10 1525234 1530652 Lan2g0444 2 4821993 4827666 PCT
Lan3g0180 3 1158062 1163553 Lan2g0444 2 4821993 4827666 PCT
Lan2g0444 2 4821993 4827666 Lan10g0241 10 1525234 1530652 PCT
Lan2g0444 2 4821993 4827666 Lan3g0180 3 1158062 1163553 PCT