Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0443 ATGGATTTTTGGAAAGAAGTTAATAGAAGTAGTTGGGGTAAGGAGTTTGTAGCAGGAGGATTTGGAGGCATTGCTGCTGTTATCTCTGGTCATCCATTAGACACAATAAGGGTCAGACAACAGAAGTCAACAACTGGTTCTGCCTTTAACATCCTTAGACATATGTTGTTTAAGGAAGGACCATGTTCTCTATACCGTGGCATGGGTTCACCATTGGTTGCATCTACTCTTCAGAATGCTATGGTTTTCCAATCCTACACAGTTCTGACAAGAGCATTTGACTCATATATTGCTGCTAAAGACCCTTCTTCATACAAGGCTGTTGTTTTAGGAGGAGTTGGTTCTGGTGCCCTCCAAAGCTTTCTTATTTCTCCTGTGGAGTTAGTTAAGATTCAAGTCCAACTTAGAGGCATTTGTGGGACAAAGTTGCCTCCTTCTAGGTCCTGTAAGGGTCCTATAAGAGTAGTTCAAAATATATGGAAAAATGAGGGACTTGTAGGCATGTATAGAGGACTTTTCATCACTATGATAAGGGATGCACCTTCCCATGGTGTGTACTTTTGGACATATGAATACATGAAGGAACAACTTCACCCGGGTTGCAGAAAAAACTGTGATGAAAGCTTGAATACTATGTTGGTAGCAGGAGGGTTAGCAGGGGTAACTAGTTGGGTTTTTTGCTACCCTTTTGATGTTGTAAAGACAAGACTACAGGCACAAACACCGTCTTCGTTGAAATACAAAGGCATTTTCGATTGCTTCGCGAAGATTGTTCGAGAAGAAGGGCATGCTGCGCTTTGGCGCGGTGTAGAAACTGCGGTTGCTAGAGCGTTTGTCGTGAATGGTGCTATATTTGCTGCTTATGAGGCTACATTAAGAATTATGTTTAACAATTATAATCAAACGCGAGACACAATCTAA 921 0.4159 MDFWKEVNRSSWGKEFVAGGFGGIAAVISGHPLDTIRVRQQKSTTGSAFNILRHMLFKEGPCSLYRGMGSPLVASTLQNAMVFQSYTVLTRAFDSYIAAKDPSSYKAVVLGGVGSGALQSFLISPVELVKIQVQLRGICGTKLPPSRSCKGPIRVVQNIWKNEGLVGMYRGLFITMIRDAPSHGVYFWTYEYMKEQLHPGCRKNCDESLNTMLVAGGLAGVTSWVFCYPFDVVKTRLQAQTPSSLKYKGIFDCFAKIVREEGHAALWRGVETAVARAFVVNGAIFAAYEATLRIMFNNYNQTRDTI* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0443 306 Gene3D Mitochondrial carrier domain 12 305 IPR023395 -
Lan2g0443 306 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 297 - -
Lan2g0443 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Lan2g0443 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 196 IPR018108 -
Lan2g0443 306 PRINTS Mitochondrial carrier protein signature 107 120 IPR002067 GO:0055085
Lan2g0443 306 PRINTS Mitochondrial carrier protein signature 171 191 IPR002067 GO:0055085
Lan2g0443 306 PRINTS Mitochondrial carrier protein signature 222 240 IPR002067 GO:0055085
Lan2g0443 306 PRINTS Mitochondrial carrier protein signature 267 285 IPR002067 GO:0055085
Lan2g0443 306 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 297 - -
Lan2g0443 306 Pfam Mitochondrial carrier protein 107 197 IPR018108 -
Lan2g0443 306 Pfam Mitochondrial carrier protein 212 298 IPR018108 -
Lan2g0443 306 Pfam Mitochondrial carrier protein 10 93 IPR018108 -
Lan2g0443 306 SUPERFAMILY Mitochondrial carrier 11 289 IPR023395 -
Lan2g0443 306 ProSiteProfiles Solute carrier (Solcar) repeat profile. 207 294 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0443 Lan-Chr2 4805026 4808613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0443 1 298 Antiporters AT1G79900 60.535 1.62e-123 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0443 K15109 - gmx:100812056 415.616