Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0434 ATGATGGCTGAGAACCCTAACTGGTGGAATATGAATCCACCATCTTTGAGCCCTCCCCAGTATTTGCTTGAATCTTCTTCAATTCCTTTTAATTCTTTGACAGAAAATCCAGAACCCCCTCAGCCATGGAGCCAACTTCTTTTCACTGAATTACCTAGAGAAGAAGAGAGAGTGGGATTCAGTCATTTTCAATCAAAAAAGTTCGAAAACTGGGATGACCATATTCTTAATCCATCAACAAGAGATCTTAATGTTGATTTAGTGAAGCAAGAGGGTTACCAAAGTGTCAATGTTTATGAACATGCGAATAATGAGGAATTTCATCAAGCTTTTGGAGCTGGGTTACATTGGTCACATATTGTGCAAGCCTCTAATAATTCCCCTAGTTCAAATCTCACTAGTTTGAGTAGTACTAATTTATTGGATTTCACTTATAACAATGCAGATCACACATCTGAGTGTATTAGCACAGCTACTGCTATAGCTTGTAAGAAAGCCAAGGGTCAACCATCTTCAAGCCAACCGAAGGTGAGAAAGGAGAAGCTTGGTGATAGAGTAACAGCACTTCACCAGATAGTTTCCCCATTTGGAAAGACTGACACAGCTTCTGTCCTATTAGAAGCCATTGGATATATCAGATTCCTGCAGGGTCAAATTGAGGCACTCAGTTCTCCTTACTTGGGCAATGTATCAAAAAACATAAGGAATCAACACTCAGTGATGAGTGACATTGGCTTAAAAAGAAAGGGAGCCCCAAACCAGGATACAAAAGATAATCCTAAAGACTTGAGGAGTAGAGGGTTGTGCTTGGTTCCTGTTTCTTGCACCCAACATGTTGGAAGTGAAAATGGAGCTGATTGTTGGTCATCACCTTATGGCAGTGGATTTTGA 891 0.4029 MMAENPNWWNMNPPSLSPPQYLLESSSIPFNSLTENPEPPQPWSQLLFTELPREEERVGFSHFQSKKFENWDDHILNPSTRDLNVDLVKQEGYQSVNVYEHANNEEFHQAFGAGLHWSHIVQASNNSPSSNLTSLSSTNLLDFTYNNADHTSECISTATAIACKKAKGQPSSSQPKVRKEKLGDRVTALHQIVSPFGKTDTASVLLEAIGYIRFLQGQIEALSSPYLGNVSKNIRNQHSVMSDIGLKRKGAPNQDTKDNPKDLRSRGLCLVPVSCTQHVGSENGADCWSSPYGSGF* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0434 296 PANTHER OS05G0228400 PROTEIN 11 283 - -
Lan2g0434 296 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 11 283 - -
Lan2g0434 296 Gene3D - 173 239 IPR036638 GO:0046983
Lan2g0434 296 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 166 215 IPR011598 GO:0046983
Lan2g0434 296 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 174 226 IPR036638 GO:0046983
Lan2g0434 296 CDD bHLH_AtbHLH_like 176 223 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0434 Lan-Chr2 4667117 4671870 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0434 162 278 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 54.622 3.77e-31 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0434 - - gmx:100802121 390.963