Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0429 ATGACACAAACAACCTATTCCTCTGAAACTATTACTACAACAACCAACATCAACAATAACACTTCTTCACATTCCAAAAAATTAGAGAATGCAAAAAAGACCGAGCCCAAGAGACCAAGAGATAACAGCAAGCATCCAGTGTACCATGGTGTCCGGAAGCGCAATTGGGGCAAATGGGTGTCCGAAATTCGCGAGCCACGCAAGAAATCACGAATCTGGCTCGGTACATTCGAGACACCCGAAATGGCTGCTAGAGCACATGATGTTGCTGCTTTAAGCATTAAGGGCCAATCAGCTATTCTTAATTTTCCAGAATTAGTTAACATGCTTCCTAGGCCTATCACATGCAACCCACGTGACATTCAAGCAGCGGCTACAAAGGCAGCAGGTATGGTTAAATTGGACCCTGTAGTAGTGCACACTTTAGAAGGGTCAGAAGAAGAGCTTAGTGAAATAATTGAGCTTCCAAACATTGAAGAAAAGAGCTTTGACTCGGTCAACTCCCGAACCGAGTTTACTTTGCTTGACACGGTGGATAGTTGGATGTATCCACCAATGTGGTCGGAGGAAACCGAACTCTTTATCACATTTTCGGAGGAGTCATTTGCACAACATAATTTTATTGCAAATAACTCCTTTGAATTTGAGACTGAGATGCAAATACCTATTTGGAGTTGA 678 0.4263 MTQTTYSSETITTTTNINNNTSSHSKKLENAKKTEPKRPRDNSKHPVYHGVRKRNWGKWVSEIREPRKKSRIWLGTFETPEMAARAHDVAALSIKGQSAILNFPELVNMLPRPITCNPRDIQAAATKAAGMVKLDPVVVHTLEGSEEELSEIIELPNIEEKSFDSVNSRTEFTLLDTVDSWMYPPMWSEETELFITFSEESFAQHNFIANNSFEFETEMQIPIWS* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0429 225 ProSiteProfiles AP2/ERF domain profile. 47 104 IPR001471 GO:0003700|GO:0006355
Lan2g0429 225 MobiDBLite consensus disorder prediction 1 25 - -
Lan2g0429 225 SMART rav1_2 47 110 IPR001471 GO:0003700|GO:0006355
Lan2g0429 225 MobiDBLite consensus disorder prediction 26 48 - -
Lan2g0429 225 Pfam AP2 domain 46 96 IPR001471 GO:0003700|GO:0006355
Lan2g0429 225 CDD AP2 48 106 IPR001471 GO:0003700|GO:0006355
Lan2g0429 225 MobiDBLite consensus disorder prediction 1 48 - -
Lan2g0429 225 SUPERFAMILY DNA-binding domain 47 105 IPR016177 GO:0003677
Lan2g0429 225 Gene3D AP2/ERF domain 47 106 IPR036955 GO:0003700|GO:0006355
Lan2g0429 225 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 12 189 - -
Lan2g0429 225 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Lan2g0429 225 PRINTS Ethylene responsive element binding protein signature 70 86 IPR001471 GO:0003700|GO:0006355
Lan2g0429 225 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 12 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0429 Lan-Chr2 4580355 4581366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0429 1 192 AP2-EREBP Transcription Factor Family AT5G11590 50.685 4.56e-63 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lan2g0429 AP2 5.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0429 K09286 - lang:109333798 417.927