Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0410 ATGGCGACAGTTCCAGGGCAGCTTGTGTGGGAGATCGTGAAGAACAACAACTCATTTTTGGTTAAACAATTCGGAAGAGGATCTCAGAGCATTGAATTCAGCAAAGAGCCCAACAATCTCTACAATCTCAATTCCTACAAATACTCTGGTTTGGCAAACAAGAAAACTGTTAGCATTCAGGCTGGTGGTAAGGATCAGTCTGTGGTGTTGGCTACAACCAAGACTAAGAAGCAAAATAAGCCTGCTTCCTTGGTTCACAAATCTGTCTTGAAGAAGGACTTCCGCAGGATTGCGAAGGCAGTGCAAAATCAGGTGGCTGATAACCACTACAGGCCAGATTTGAAGAAAGCAGCACTTGCAAGGTTGAGTGCAGTTCACAAAAGCCTCAAAATTGCCAAGTCTGGTCCTAAGAAAAGGAACAGGCAGGGACTGTGA 435 0.4483 MATVPGQLVWEIVKNNNSFLVKQFGRGSQSIEFSKEPNNLYNLNSYKYSGLANKKTVSIQAGGKDQSVVLATTKTKKQNKPASLVHKSVLKKDFRRIAKAVQNQVADNHYRPDLKKAALARLSAVHKSLKIAKSGPKKRNRQGL* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0410 144 Gene3D - 6 133 - -
Lan2g0410 144 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Lan2g0410 144 PANTHER 60S RIBOSOMAL PROTEIN L28-1-LIKE 1 144 - -
Lan2g0410 144 PANTHER 60S RIBOSOMAL PROTEIN L28 1 144 IPR002672 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0410 Lan-Chr2 4262236 4265604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0410 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 74.126 5.01e-77 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0410 K02903 - gmx:100499921 240.736