Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0388 ATGTGTGAAGCTCTCAAGAATAGCTACGAATTATTTGAAGAAATTGGTCGTGGCAAATTCGGCACCGTGTTCCGCTGCTACAACTCAATCACAAACAAATCCCACGCCGCCAAAATCATCCACAAACACCTCCTCACGGATTCAACCGATCGCATGTGTCTAGAAAACGAATCAAAATCCTTGACATATCTTTCCCCACACCCAAACATCCTTCAAATTAGCGACGTTTTTGAAGACAGCGAATCCTTATCGATCGTCACAGAACTCTGCCAACCCAATTTCACCCTCTTGGATCACATCACAAATCACCCCTTATCTGATCTTCAAGCCGCATCAATGATGAAGAACCTTCTAGAAGCAGTGTCATATTGCCACAAACTTGGAATAGCACATAGGGACATAAAACCAGAAAACATTTTATTTGATTCGTGGGGAAATCTTAAAGTTTGTGACTTTGGTTCAGCTGAATGGTTTGGCGACGGAAGAAACATGAATGGAATCGTGGGTACACCTTGTTATGTGGCACCTGAAGTGTTGTTAGGAAGAGAGTATAATGAGAAAATTGATGTTTGGAGTAGTGGTGTGATTATGTATATAATGTTGAGTGGTATTCCACCCTTTTATGGTGATTCTGATACACAAATTTTTGAGGCTGTTATTAGAGGGAATCTTAGGTTTCCTACTAAGATTTTTAACAATGTGTCTCCTTCTGCTAAGGATCTTATGAAGAAGATGATTTGTAGGGATCCCTCTAGAAGAATTTCTGCTGAACAAGCATTGAGACACCCATGGATCTTGAGTGGAGGTTTAGCTAGTGATCTAGCATGA 828 0.407 MCEALKNSYELFEEIGRGKFGTVFRCYNSITNKSHAAKIIHKHLLTDSTDRMCLENESKSLTYLSPHPNILQISDVFEDSESLSIVTELCQPNFTLLDHITNHPLSDLQAASMMKNLLEAVSYCHKLGIAHRDIKPENILFDSWGNLKVCDFGSAEWFGDGRNMNGIVGTPCYVAPEVLLGREYNEKIDVWSSGVIMYIMLSGIPPFYGDSDTQIFEAVIRGNLRFPTKIFNNVSPSAKDLMKKMICRDPSRRISAEQALRHPWILSGGLASDLA* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0388 275 CDD STKc_CAMK 9 264 - -
Lan2g0388 275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Lan2g0388 275 ProSiteProfiles Protein kinase domain profile. 9 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0388 275 Gene3D Transferase(Phosphotransferase) domain 1 95 271 - -
Lan2g0388 275 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Lan2g0388 275 PANTHER SERINE/THREONINE-PROTEIN KINASE 3 273 - -
Lan2g0388 275 PIRSF ILK 3 261 - -
Lan2g0388 275 Pfam Protein kinase domain 9 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0388 275 SUPERFAMILY Protein kinase-like (PK-like) 5 267 IPR011009 -
Lan2g0388 275 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 2 3 273 - -
Lan2g0388 275 SMART serkin_6 9 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0388 Lan-Chr2 3838804 3840458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0388 3 273 EF-hand Containing Proteins AT1G50700 40.364 4.30e-70 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lan2g0388 Pkinase 9.8e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0388 - K08794 gmx:548089 403.675