Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0386 ATGTTGAAGAGTCATTGTTGTGAGAATATGGGATTAAAGAAGGGACCTTGGACTGCTGAAGAAGATCATATTTTGATTTCTCATATTCAACTATATGACCATGGAAACTGGCGTGCTCTTCCTAAACTAGCTGGTTTATTAAGGTGTGGCAAAAGTTGTAGGCTTCGATGGATAAATTATTTAAGACCGGATATCAAACGTGGCAAATTCAGCAAAGAGGAAGAAGAAACCATTCTCAATCTCCGTCAAATTCTTGGAAATAGATGGTCTATGATTGCTGCAAGATTACCAGGAAGAACAGATAATGAAATAAAGAACTTTTGGCACACCCATTTGAAGAGGAAGAAGTTTGAGAAAAGTGAAGTATTGCACAATAATAATGCAATCTCCAATTCACACCCCTTGCAATTAGAGACACTAGCAACAACAACAACTTGTTCTAGTTCAGGGGCTCTAATGACCATGCCACTTGTAACACATGATCATGCATGCTCAACTTCTTCTGAAGTATTGATTAATGATACTAGTCCAGCAGAAACCATAGGGAATAATCAGTTTAGTGAAGAAATGGAATTTTGGTACAATGTATTTATCTATTCAGGTCAGATATCATAA 615 0.3675 MLKSHCCENMGLKKGPWTAEEDHILISHIQLYDHGNWRALPKLAGLLRCGKSCRLRWINYLRPDIKRGKFSKEEEETILNLRQILGNRWSMIAARLPGRTDNEIKNFWHTHLKRKKFEKSEVLHNNNAISNSHPLQLETLATTTTCSSSGALMTMPLVTHDHACSTSSEVLINDTSPAETIGNNQFSEEMEFWYNVFIYSGQIS* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0386 204 Gene3D - 13 66 - -
Lan2g0386 204 CDD SANT 69 112 IPR001005 -
Lan2g0386 204 PANTHER MYB TRANSCRIPTION FACTOR 1 202 - -
Lan2g0386 204 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lan2g0386 204 CDD SANT 16 61 IPR001005 -
Lan2g0386 204 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lan2g0386 204 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lan2g0386 204 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lan2g0386 204 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 202 - -
Lan2g0386 204 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lan2g0386 204 Gene3D - 69 115 - -
Lan2g0386 204 SMART sant 66 114 IPR001005 -
Lan2g0386 204 SMART sant 13 63 IPR001005 -
Lan2g0386 204 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lan2g0386 204 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0386 Lan-Chr2 3809362 3811935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0386 1 115 MYB Transcription Factor Family AT2G31180 74.783 7.17e-64 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lan2g0386 Myb_DNA-binding 9.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0386 K09422 - gmx:102663040 245.743