Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0374 ATGACTCATAGAGTAAATTTCATTCATGAAATCAATGCTTCCAGAGATACCTGGAAGTTGAAGGTGAGGATTATTGGTCTTTGGCGTGTAAGTCGGTCCTCAACACCATCGATAGAGATGATTTTCATGGATGAAAAGGGTGATAAAATTCAAGCTATAGTGAAGAAATATCATATAGCGCAGTGGGAACCTCAATTGCAGGAAGGCAAAAGTTATATTGCTGAGAATTTTGATATTGTGCTTAATGAAGGACGATATAGAAGTTCAAATCACTCATTCAAATTAATATTTCAGAAAGGGACTATCATGAAAAACAAGGAACTTCCTGAAATTCCTCTTTATATTTATAAGTTTACTACTTTCGAAGACATTTTGAATGGGGTTGTTACTAGTGATGTTTTAGTTGATGTTATTGGTGAGTTTGTTGACATAGAGATGAGCCAACCAGAGTCAACTCCAAAGAAGGTAGTTTTCATAATGCGAGACCAAAGGGGGAATAGAATTAGTTGTACCTTATGGGGACAATTTGCTACACAATTGCTTAAGTATGAGGAAGATCACAAGCTTGATCCTATTGTTGTTATACTGACCCTTGCAAAGATCAAGGAGGCTAGAGGATGCCACCCAGTCACTATTCAGAATGCCATGTACAGTTCTAAGCTTTACATAAACGACAACAATATTCCAGAGATTCAATATTTCACTAGCAGTATGAGCCAGTCGTCTTCATGCTCTCAAGGTGGGTTGCAAGACAAGTTCTTTTATAATGCAACCGTAAAAACAATTGGTGAGATAATTCATGTTTGCGAGGAATCTGTTTCTCTTACTTACGGCACCATTGACAAACTTTTTTCTAATGGGTGGTACTATGAAGGGTGCCCCCATTGCAATCAAAAGACTGACACAATTAGCATACCGGGTAATTGTGTTGGTTGTGGAAAGTACTTAGACGATGTTGTGGCAAGGTATAGAATAGAGGTTCGGGTTAGCTATGGTCATGATAGCATGAAATTTGTTTTATGGAACCGTGAATTCTATCTATTACTGAATAGGGAAATTGTTGCTTTTATTTTTACTTTTAAAGGTGAAAATGTCATCTCTTATATCTAA 1110 0.3685 MTHRVNFIHEINASRDTWKLKVRIIGLWRVSRSSTPSIEMIFMDEKGDKIQAIVKKYHIAQWEPQLQEGKSYIAENFDIVLNEGRYRSSNHSFKLIFQKGTIMKNKELPEIPLYIYKFTTFEDILNGVVTSDVLVDVIGEFVDIEMSQPESTPKKVVFIMRDQRGNRISCTLWGQFATQLLKYEEDHKLDPIVVILTLAKIKEARGCHPVTIQNAMYSSKLYINDNNIPEIQYFTSSMSQSSSCSQGGLQDKFFYNATVKTIGEIIHVCEESVSLTYGTIDKLFSNGWYYEGCPHCNQKTDTISIPGNCVGCGKYLDDVVARYRIEVRVSYGHDSMKFVLWNREFYLLLNREIVAFIFTFKGENVISYI* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0374 369 Gene3D - 3 105 IPR012340 -
Lan2g0374 369 SUPERFAMILY Nucleic acid-binding proteins 116 240 IPR012340 -
Lan2g0374 369 PANTHER REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT B-LIKE 8 351 - -
Lan2g0374 369 CDD RPA1_DBD_B_like 136 234 - -
Lan2g0374 369 SUPERFAMILY Nucleic acid-binding proteins 8 104 IPR012340 -
Lan2g0374 369 PANTHER REPLICATION FACTOR A 1, RFA1 8 351 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Lan2g0374 369 CDD RPA1_DBD_A_like 19 103 - -
Lan2g0374 369 Pfam Domain of unknown function DUF223 39 134 IPR003871 -
Lan2g0374 369 Gene3D - 244 357 IPR012340 -
Lan2g0374 369 Gene3D - 109 243 IPR012340 -
Lan2g0374 369 SUPERFAMILY Nucleic acid-binding proteins 259 351 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0374 Lan-Chr2 3684714 3692346 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0374 1 330 Core DNA Replication Machinery Family AT5G08020 24.528 8.17e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0374 - - lang:109325982 747.273