Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0331 ATGAACTACATCAAACAAACCCCACCCAAGAAAAATAGTAAGAAGTTTTTTTTGGCCCTCTTAGCTACTTTCCTTCTTGCAACCACCGTAGTCGGCATTGTCGTCGGAGTAGTCTCACGCAGAAACTCCGACGACAATGCCAACTCCAACTCTCCACCTTCCCATGCCATAATAAAAAGTGCTTGCAGCAGCACATTGTACCCTGAACTCTGCTTCTCAACCATAACCTCTGAACCATCAAGTGTTACCAACAAAGTTTCAACGCACAAAGATGTGATACTCTTATCCTTGAACATATCCACCGGAACTGTTGAACGCAATTACTTCACCATTAAGAAACTCATAAACCAAAAAGGGAGAAGTAAGAGAGAAAAAGTAGCACTCCATGATTGCTTAGAAACTATTGATGAGTCACTCGATGAACTTAAAAAAGCAATAGATGAACTCAAAGATTACCCAACTAGTAAAAAATCACTGTTTCAGCATGCTGATGATCTCAAAACTCTGTTGAGTTCAGCCATAACAAACCAAGAAACTTGCTTAGATGGTTTCTCACATGATGAAGCTTGCAAGCGCACTAGGAAAAATGTAGAGGGAGGGCAAGTGCATGTGGAGCGTTTGTGTAGCAATGCTTTGGCTATGGTGAAGAATCTCACTGATACTGATATGGCCAATGATGAGAAGAATAAGATGATGGTAGGAAGCAACAACAGGAAGCTCAAGGAGGAGGGTGAGATTAAGTGGCCGGAGTGGATTTCTACCGCGGATAGGCGGCTTCTGCAGTCGTCTACCATTACCCCGAATGTTGTGGTGGCGGCTGATGGCAGCGGCAACTATAGAACGGTGTCGGCCGCTGTGGCAGCTGCACCTGAGAACAGTGCCAAAAGATATGTAATAAGGATAAAAGCAGGAGTGTATAAAGAAAATGTGGATGTGCCTAAGAAGAAGACTAATATAATGTTTTTGGGTGATGGAAGATCTAATACTATCATCACTGCTAGTAAAAATGTTGCTGATGGCAGCACAACCTTCAACTCAGCCACTGTCGCTGCAGTGGGAGAAAGATTCTTAGCAAAAGACATAACATTCCAAAACACAGCAGGTGCTTCAAAGCACCAAGCAGTGGCACTAAGAGTAGGAGCAGACCTATCAGCTTTCTATTTATGTGACTTCCTTGCATACCAAGACACACTTTATGTTCACAGCAATAGACAATTCTTTATTAATTGTCTTATATCAGGAACTGTAGATTTCATATTTGGTAATTCAGCTGTTGTGTTACAAAATTGTGACATTCATGCTAGGCGTCCTGATCCTGGCCAAAAGAATATGCTCACTGCACAAGGTCGCACTGACCCTAACCAAAATACAGGCATTGTAATCCAAAAAAGTAGAATTGGTGCCACAAAAGATTTGGAACCTGTGAAGAGCAGTTTCCCTACATATCTTGGGAGACCATGGAAGCTATACTCTAGAACTGTAATCTTGCAAACAACTATAAGTGATGTTATTCAACCAGCTGGTTGGTTTGAATGGGATGGGAATTTTGCTCTCAACACTTTGTTTTATGGAGAATATCAAAACACTGGGCCAGGTGCTTCTACCTCAGGAAGGGTTAAATGGAAAGGGTATAAGGTCATTACTAGTGCTACTGAGGCCCAAACTTATACACCAAGGAATTTCATTGCAGGCTCTGGTTGGTTGGGCTCTACTGGGTTTCCTTTCTCTCTTGACCTTTAA 1740 0.4218 MNYIKQTPPKKNSKKFFLALLATFLLATTVVGIVVGVVSRRNSDDNANSNSPPSHAIIKSACSSTLYPELCFSTITSEPSSVTNKVSTHKDVILLSLNISTGTVERNYFTIKKLINQKGRSKREKVALHDCLETIDESLDELKKAIDELKDYPTSKKSLFQHADDLKTLLSSAITNQETCLDGFSHDEACKRTRKNVEGGQVHVERLCSNALAMVKNLTDTDMANDEKNKMMVGSNNRKLKEEGEIKWPEWISTADRRLLQSSTITPNVVVAADGSGNYRTVSAAVAAAPENSAKRYVIRIKAGVYKENVDVPKKKTNIMFLGDGRSNTIITASKNVADGSTTFNSATVAAVGERFLAKDITFQNTAGASKHQAVALRVGADLSAFYLCDFLAYQDTLYVHSNRQFFINCLISGTVDFIFGNSAVVLQNCDIHARRPDPGQKNMLTAQGRTDPNQNTGIVIQKSRIGATKDLEPVKSSFPTYLGRPWKLYSRTVILQTTISDVIQPAGWFEWDGNFALNTLFYGEYQNTGPGASTSGRVKWKGYKVITSATEAQTYTPRNFIAGSGWLGSTGFPFSLDL* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0331 579 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 219 IPR035513 -
Lan2g0331 579 TIGRFAM PME_inhib: pectinesterase inhibitor domain 31 219 IPR006501 GO:0004857
Lan2g0331 579 ProSitePatterns Pectinesterase signature 2. 412 421 IPR033131 -
Lan2g0331 579 PANTHER PECTINESTERASE 13 578 - -
Lan2g0331 579 ProSitePatterns Pectinesterase signature 1. 293 312 IPR018040 -
Lan2g0331 579 SMART PMEI_2 53 214 IPR006501 GO:0004857
Lan2g0331 579 Pfam Plant invertase/pectin methylesterase inhibitor 57 214 IPR006501 GO:0004857
Lan2g0331 579 CDD PMEI-like_3 60 219 - -
Lan2g0331 579 Pfam Pectinesterase 268 564 IPR000070 GO:0030599|GO:0042545
Lan2g0331 579 Coils Coil 132 152 - -
Lan2g0331 579 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 220 IPR035513 -
Lan2g0331 579 PANTHER PECTINESTERASE 13 578 - -
Lan2g0331 579 Gene3D - 261 579 IPR012334 -
Lan2g0331 579 SUPERFAMILY Pectin lyase-like 263 578 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0331 Lan-Chr2 2983893 2989745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0331 10 579 Carbohydrate Esterase AT3G14310 65.928 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0331 K01051 - jre:109004988 791.186