Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0317 ATGAAGAAGAACACACAGCAACCTTCAGGCGATAAAAGCCTTCAGCAATTCTTCAAGGTTTTCTTGTCCCAAACAAGTTCTACTCAGTTGCGAATACCAAGGGCTTTCAACAAGTTCTTGAATGGAATTACAACAAACGAGGTCACTCTTATGGATCATGAAAATAACTCTTGGGACATTGACATGGCAAGAATAGAGGATACTTTTATTTTTGAAAATGGATGGCAACAATTTGCTAAGGAGAAATGTTTAGAAGAAGGAGAATTCTTGGTTTTTGAGTATGATGGCAAGTCTACATTTTATGTGAAGATATTTTCCAAAAGTGGGTGTAGGAAAGAATTTGAAACTTGTAATAAAGTTGTTCCTATTGTGAATATGGATGAAGGTTGTGACCAGATTTGTCAAAAAAATAAGAGGGGTCGTAAACGCAAACATTCATCAATAGGCCTCCAAATAAATGAAAAATCAAATTTAGAAGGGCCATCTAAAGTTGCTAAAAAGAGCAAACCAACAATAGCTAATGGAGCTAATGGTGAAGGCTATAATAAGAAACATTCAACTGATTCTTCTAAGTGTGCTCCACCAAACAACCCTCATTTCATAGTACATTTTTCTTCCACCACCAAACTAAAAAGAGTGGAAATTCATAAGACAATATTGAGGAAATGGGACATGAAATTGAGGTCAACATTGAGTCTAAAAAATGAGAATGGAAAAGTATGGTTGGTGAAGATCTCTACCACTCTTGATGGTCGATATTATTTAGGTATTGGGTTGTCTGATTTCGTGAAGAGTAATAATATTAGAAAAGGAAATCAATGTGAGTTTGAGTTTGTCATTGGCGAAAGAAATGTAGTCAAAGAAATTCTTGTGCATGCCCCTAAGTAA 888 0.3525 MKKNTQQPSGDKSLQQFFKVFLSQTSSTQLRIPRAFNKFLNGITTNEVTLMDHENNSWDIDMARIEDTFIFENGWQQFAKEKCLEEGEFLVFEYDGKSTFYVKIFSKSGCRKEFETCNKVVPIVNMDEGCDQICQKNKRGRKRKHSSIGLQINEKSNLEGPSKVAKKSKPTIANGANGEGYNKKHSTDSSKCAPPNNPHFIVHFSSTTKLKRVEIHKTILRKWDMKLRSTLSLKNENGKVWLVKISTTLDGRYYLGIGLSDFVKSNNIRKGNQCEFEFVIGERNVVKEILVHAPK* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0317 295 Gene3D - 192 291 IPR015300 -
Lan2g0317 295 Gene3D - 9 110 IPR015300 -
Lan2g0317 295 SUPERFAMILY DNA-binding pseudobarrel domain 194 279 IPR015300 -
Lan2g0317 295 CDD B3_DNA 17 106 IPR003340 GO:0003677
Lan2g0317 295 PANTHER B3 DOMAIN-CONTAINING 6 283 - -
Lan2g0317 295 Pfam B3 DNA binding domain 17 107 IPR003340 GO:0003677
Lan2g0317 295 Pfam B3 DNA binding domain 205 281 IPR003340 GO:0003677
Lan2g0317 295 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS01G0723500-LIKE ISOFORM X1 6 283 - -
Lan2g0317 295 SUPERFAMILY DNA-binding pseudobarrel domain 13 110 IPR015300 -
Lan2g0317 295 MobiDBLite consensus disorder prediction 159 192 - -
Lan2g0317 295 CDD B3_DNA 198 279 IPR003340 GO:0003677
Lan2g0317 295 ProSiteProfiles B3 DNA-binding domain profile. 198 295 IPR003340 GO:0003677
Lan2g0317 295 ProSiteProfiles B3 DNA-binding domain profile. 15 108 IPR003340 GO:0003677
Lan2g0317 295 SMART B3_2 17 108 IPR003340 GO:0003677
Lan2g0317 295 SMART B3_2 201 295 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0317 16 291 B3 DNA Binding Superfamily AT5G66980 30.820 3.99e-30 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lan2g0317 B3 8.7e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0317 - - lang:109328674 605.905