Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0316 ATGTTGAACAATATTGGTTCCATGGTTGGTGAAAAAGTAGTTGAAGCAGTGAACTTGCTTAGTGGTGTCCACAAAGAAGTTGAAGAGATTAATGAAGAACTTGAAAGCATTCAAGTCTTTATCAATGGTGCTGATAGAATGGCTGCAACAACTGAACAAGAAAACAAAGGTGACAATGGAATGAAAAGAAAGGTGAAGGAGCTTAGAGAAGCATCTCTACGCATAGAAGAAGTCACTGAAGACTATATGATCACTCAACAACAACAACAATCTCATGATCCTGGATGTGTAGCTATATTTCATGCTGCAACAAACTTTATCAAAACTATGTTCCGTCGTCTTCGAGTTTCTTATGAGATTCAAGACATCAAAACAAGTATTCGTGAAATCAATGAAAGATCTGGCTTACAAATCCAATCTTTTCTTGAACAAGGATCAACCAGTGGAAGCCAAAATGTCCTATCACAACATGCCCTTAGAAGGAATGCTCTTTATGTTGAGGAAGATGATGTTGTTGGGTTTGAAAGTCCTAAACATGAATTGATTGGTTGGTTGAAAGAGACACAACCAAAACGCACTGTGATCATTGTTGTTGGAATGGGAGGGCAAGGAAAAACCACTCTTGCCAAGATAGTTTACGACAAGGTGATTGGTGACTTTGATTGCCATGCATGGATCACAGTGTCTCAGGCATACAGCATAGAAGATTTGTTGAGGACTATGTTGAAGAAGTTGGGTGAAAACAGAAATGATGTTTCTGTAATGGATCTAGAGTCATTGACCAATGAAGTGAGAAAGTGCTTGAGTCAAAAAAGGTATGTTGTCTTCTTTGATGATGTATGGAATAAAGACTTCTGGAGTGAGATTGAATCAGTTGTGCTTAATGATAAAAACAGAAGTAGGGTTGTAATTACAACAAGAGACATGGAGGTTGCAAACTTTTGTAAGAAATCTTCTTTTCATATTCACAACTTGCAACGCTTATCTTCACAAGAATCGATGAAACTTTTTTGCAAGAAGGCATTCCAAAATGAACCTGATGACATTTGTCTAGCAGGTCTTGAGGAAATATCCTCCAATATTGTTGAAAAGTGTGAGGGGTTACCTTTGGCAATTGTTGCCATTGGTAGTCTTATAGCTTGCAATGGAAAAAACTCACTTCAATTGCAAAAGTTGTGTAAGGCATTGAATTATGAGCTAGACAAGAATCCCAATTCAACTAGTATAACAAATATTTTAGGTCTTAGTTATGATGTTTTGCCTTATCATCTGAAGCCATGCTTTTTGTATTTTGGAATATACCCAGAGGACTATGAAGTTAATTCTAAACGACTGATTCGACAATGGATAGCTGAGGGGTTTGTTAAATCTGATGAACGCCATGAAACTTTGGAGGAAGTTGGGGAACAATATTTGAAAGAGTTGATCCAAAGAAGTTTGGTGCAAGCATTTTTATTTAGCGTTGATGGAAAACCTAAGAGATGTCGTGTTCATGACTTATTACGTGACATGATCCTTACAAAAATTAAGGATTTAGGTTTTTGTCACTTTGTTAGTGATGATGCAGACAATCAATCAAAACTTAATGGAAAGATTCGACGCTTACAAATAACAATTTATTCTGTCGGTATTCATTTGAAGGATTCCAATATTGAAGGCTCATTAATTCGGTCTCTTCATGTCTTTAGAAATAAAGGATTACCTGAAGACTTAGGGAGGATACTACCTACAGAATGCATACGATTGAAGGTATTTGAACTTCATTGGCCTAACTATATTCCTGAAAATTGTGGGAATTTAATCCACTTGAGATATTTAAGCTTGTGGAATGATCAATACATGAGAAGTCTTCCAGAATCCATTGGTAACCTCCAAAACCTAGAGACCTTGGATCTAAAGGGACTATTTGCTCTTTCTTTGCCAAGAGAGATTAACAAGCTTAGGAAGTTGCGTCATCTTATTCGGTTGTCAAAAATGATGGGAGGTGTTAGAGGTTTAGAATCCCTACAAACACTATATCTTGTGGACACAGAAGAGTGGGGAGAAGAGTTCTTTGAAGAGCTTCAAGAGTTGAAGCAGTTAAGGTCATTAGGGTTGTTGAGTGTTGAGCCAAAATATCTAAGTACCTTGTGTTGCTCAATAAATAATATGCAACACCTTGAGAAGTTATACATTGATGTAACAGGAAGAACTGATTATGGATGTATCTCACCTATACTTACACTTCAGAAGCTTCAACTAGTAGGGAAGTTAGAGAGGTTTGAAGAGTGGATTCCAAAGCACCGAAATCTTGTTAAATTGACCTTGACAAACTCCTACTTGATTGATGATCCAATGAAATCACTCATGCATCTGCCAAACTTGTTGTCTTTGTTTCTTTGGAATGCATATGAAGGTAAAACTTTGCATTTCGAAAATGGGATGTTTCAGAAACTTAAGAAACTAGATCTAAGATGTTTGGTTCCTTTGAATTCCGTTCATATCGGTGAAGGAGCACTGCCATTGCTGAAACAGTTGAAGTTAGAGTTTATCCATGAACTCGAAGAGGTTCCCTCTGGTATGGATCAATTAGGCAAGCTTCAAGTTTTCAGCATTAAGAGTATGCCACAAAAATTTGTTGATCTCATAAGACAAAATATATGGGTCCAGAACAATGTCCCCACAGTAATTTATTAA 2676 0.3688 MLNNIGSMVGEKVVEAVNLLSGVHKEVEEINEELESIQVFINGADRMAATTEQENKGDNGMKRKVKELREASLRIEEVTEDYMITQQQQQSHDPGCVAIFHAATNFIKTMFRRLRVSYEIQDIKTSIREINERSGLQIQSFLEQGSTSGSQNVLSQHALRRNALYVEEDDVVGFESPKHELIGWLKETQPKRTVIIVVGMGGQGKTTLAKIVYDKVIGDFDCHAWITVSQAYSIEDLLRTMLKKLGENRNDVSVMDLESLTNEVRKCLSQKRYVVFFDDVWNKDFWSEIESVVLNDKNRSRVVITTRDMEVANFCKKSSFHIHNLQRLSSQESMKLFCKKAFQNEPDDICLAGLEEISSNIVEKCEGLPLAIVAIGSLIACNGKNSLQLQKLCKALNYELDKNPNSTSITNILGLSYDVLPYHLKPCFLYFGIYPEDYEVNSKRLIRQWIAEGFVKSDERHETLEEVGEQYLKELIQRSLVQAFLFSVDGKPKRCRVHDLLRDMILTKIKDLGFCHFVSDDADNQSKLNGKIRRLQITIYSVGIHLKDSNIEGSLIRSLHVFRNKGLPEDLGRILPTECIRLKVFELHWPNYIPENCGNLIHLRYLSLWNDQYMRSLPESIGNLQNLETLDLKGLFALSLPREINKLRKLRHLIRLSKMMGGVRGLESLQTLYLVDTEEWGEEFFEELQELKQLRSLGLLSVEPKYLSTLCCSINNMQHLEKLYIDVTGRTDYGCISPILTLQKLQLVGKLERFEEWIPKHRNLVKLTLTNSYLIDDPMKSLMHLPNLLSLFLWNAYEGKTLHFENGMFQKLKKLDLRCLVPLNSVHIGEGALPLLKQLKLEFIHELEEVPSGMDQLGKLQVFSIKSMPQKFVDLIRQNIWVQNNVPTVIY* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0316 891 CDD RX-CC_like 1 132 IPR038005 -
Lan2g0316 891 Gene3D - 1 117 - -
Lan2g0316 891 Gene3D - 148 323 IPR027417 -
Lan2g0316 891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 431 IPR027417 -
Lan2g0316 891 Gene3D Ribonuclease Inhibitor 552 886 IPR032675 -
Lan2g0316 891 PANTHER DISEASE RESISTANCE PROTEIN RP 25 867 IPR044974 GO:0006952
Lan2g0316 891 Pfam NB-ARC domain 176 418 IPR002182 GO:0043531
Lan2g0316 891 Gene3D - 327 416 IPR042197 -
Lan2g0316 891 PRINTS Disease resistance protein signature 194 209 - -
Lan2g0316 891 PRINTS Disease resistance protein signature 267 281 - -
Lan2g0316 891 PRINTS Disease resistance protein signature 365 379 - -
Lan2g0316 891 PRINTS Disease resistance protein signature 622 638 - -
Lan2g0316 891 SUPERFAMILY L domain-like 496 872 - -
Lan2g0316 891 Pfam Rx N-terminal domain 7 91 IPR041118 -
Lan2g0316 891 Gene3D - 417 508 IPR036388 -
Lan2g0316 891 Coils Coil 61 88 - -
Lan2g0316 891 PANTHER - 25 867 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0316 Lan-Chr2 2763006 2765761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0316 199 376 WRKY Transcription Factor Family AT5G45050 30.556 2.35e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0316 K13457 - gmx:100806153 701.049