Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0313 ATGGCATCATCTGACCAAAACGACACCGTTTTCGCCGCAGAAGACATGAACGACGACGAAGATGAATCTCACGATGACTTATTAGAAGAAGAGGAAGAAGAAGAAGAAGAATTCGACGACGACGTTTTACCCGATTACGACGATAACGAACCTTCCCCTTCCACCTCCTCCGCCCTCGCCGTCACCATCGCCGTTCCACCTCCGATCTCACCCGCCACCGCAATCACCGCCGCCGTATCCGACTCAAAACAACTCCTAATTGAAGATAAAAAACCAATCGATGATTCGAGAAGACTCTTTCAACGTCTTTGGACCGATGAAGATGAGATCGAACTCTTACAAGGCTTCCTCGATTACACGTCTCAGCGTGGATCATCTCATCATAACGACACTGCTTTGTTCTATGATCAGATCAAATCGAAGCTTCAGCTCGATTTCAATAAGAATCAGTTGGTGGAGAAGATTCGAAGGTTGAAGAAGAAGTACCGTAATGTTCTTAACAAAATCAGCTCCGGTAAGGAATTTTTGTTCAAGAGTGCTCATGATCAAGCGACTTTCGAAATCTCGCGCAAGATCTGGAGCAATATTGGTCAAATCAGTGGTGGTGTTGTTGATGATAATGCTTTGGATGAAGATGAAATCAATCTTAACCCGATTCAAAACCCTAATAACCATAACCCTAACATTAATCTCAATTTGGTTCAGCCAGGGCCAAAATATGAGGTCGTGATGCTAGGAAATTCTGGGGAGAAGAAGAGTACGCCATCCAGGAAGAGATCGCGGCCAAGATCGGGGATGATGAGGATCGATGAGAAACCACGCGAATTTTTTAATGGTGGATCGGGATCAGGGTTGAATTTGAATTTGAACCAGGATCATAAGTGTATCAGCAATTCTACTCCTGCAAGGGTTGCTGCTAATGTTAACAATAATAAGAATTATGAGAATAATTGTAACAGTGGGAAGCAGCATAGTAGTAGCAGTAGTATACCTGGTTTGATTGAAGAAACTGTGAGGAGTTGTTTGACGCCGGTGTTGAAGGAATTAGTGGCTGGTGGTGGTGGTGTTATGGGAGGAGGTACGTTTGGGGCGAGAGGATTTGGAATTGGAGGGTTTGGATCGATGAATTCAATACCGATGCCAATGCCAATGATGCCATTGAGTTATTTGGGATTGGGAAGTGGTGATGTGGTGGATGAGAAGTGGAGGAAGCAACAAATTTTGGAGTTGGAAGTTTATGCGAAACGATTGGAGCTGGTGCAGGATCAGGTGAAGGCTGCTTTGGAGGAGTTGAGATCGGCTGGTGGTTCATGA 1314 0.4475 MASSDQNDTVFAAEDMNDDEDESHDDLLEEEEEEEEEFDDDVLPDYDDNEPSPSTSSALAVTIAVPPPISPATAITAAVSDSKQLLIEDKKPIDDSRRLFQRLWTDEDEIELLQGFLDYTSQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKISSGKEFLFKSAHDQATFEISRKIWSNIGQISGGVVDDNALDEDEINLNPIQNPNNHNPNINLNLVQPGPKYEVVMLGNSGEKKSTPSRKRSRPRSGMMRIDEKPREFFNGGSGSGLNLNLNQDHKCISNSTPARVAANVNNNKNYENNCNSGKQHSSSSSIPGLIEETVRSCLTPVLKELVAGGGGVMGGGTFGARGFGIGGFGSMNSIPMPMPMMPLSYLGLGSGDVVDEKWRKQQILELEVYAKRLELVQDQVKAALEELRSAGGS* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0313 437 Pfam Protein of unknown function, DUF573 100 194 IPR007592 GO:0006355
Lan2g0313 437 Coils Coil 17 37 - -
Lan2g0313 437 MobiDBLite consensus disorder prediction 1 57 - -
Lan2g0313 437 Coils Coil 148 168 - -
Lan2g0313 437 PANTHER BNAANNG10740D PROTEIN 1 435 - -
Lan2g0313 437 MobiDBLite consensus disorder prediction 246 278 - -
Lan2g0313 437 MobiDBLite consensus disorder prediction 12 47 - -
Lan2g0313 437 PANTHER BNAANNG10740D PROTEIN-RELATED 1 435 IPR007592 GO:0006355
Lan2g0313 437 Coils Coil 410 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0313 Lan-Chr2 2718778 2720605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0313 3 433 GeBP Transcription Factor Family AT5G28040 45.217 3.45e-99 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lan2g0313 DUF573 4e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0313 - - gmx:100779712 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0845 4 10393323 10395207 Lan2g0313 2 2718778 2720605 LSH
Lan2g0313 2 2718778 2720605 Lan16g1105 16 18173381 18175092 LSH