Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0308 ATGGGTTTTGAATTTAGTCATGTACTTTCAAAAATGCAAATGTTATATATGTCAGATCATGGTTCAGTGGTCTCAATGAACATATTTGTGGCACTCCTATGTGCATGTATTGTCTTAGGACATCTTCTTGAGGAGTATAGATGGATAAATGAATCAATCACTGCACTTTTGATAGGTCTTTGCACTGGTGTAGTTATTTTGATGTTTAGTGGTGGTAAAAGCTCACATCTACTGATTTTCAGTGAAGATCTTTTCTTCATATACCTTCTCCCACCAATTATATTTAATGCCGGGTTTCAAGTGAAAAAGAAGCAATTTTTTGTTAACTTCATTACCATTGTGATGTTTGGTGCTGTTGGTACACTCATATGTTGGACCATAATAACAGTTGGTGCCATACAAATTTTTAAGAGGATGGGTATTCATTCTCTGGAGTTAGAAGATTATCTAGCAATTGGTGCAATATTTGCTGCAACAGATTCTGTATGCACGTTGCAGGTGCTAAACCAGGACGAGACACCTTTATTGTACAGTCTTGTATTTGGTGAGGGTGTTGTGAATGATGCTACATCAGTGGTGCTTTTCAATGCAATCAAAAGTTTTGATCTCAACCATATTGACTCAGGAGTTGCTTTGCAATTTCTTGCCAATTTCTTGTATCTGTTTATAGCAAGTACTATGCTTGGTGTTTTGACTGGTCTACTTAGTGCTTACATTATTAAAAAGCTATATATTGGCAGGCACTCTACGGATCGCGAGGTTGCCCTTATGATGCTAATGGCATACCTTTCCTATATGCTGGCTGAATTATGTTATCTTAGTGGCATTCTCACTGTATTCTTTTGTGGGATTGTCATGTCACATTATACTTGGCATAATGTGACTGAGAGCTCAAGAACCACTACTAAACATTCTTTTGCAACCTTGTCCTTTGTTGCTGAGACATTTATCTTCCTCTATGTTGGTATGGATGCCTTGGACATTGAAAAATGGAGATTTGTTAGTGATAGCCCTGGAACATCTATTGCTGTGAGTTCAGTATTATTGGGACTAATACTCACTGGAAGAGCAGCTTTTATTTTCCCTTTATCATTCTTATCCAACTTGACTAAAAAATCACCAAATGAGAAAATAAGCTTCAGACAACAAGTAATCATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATAGCACTTGCTTATAATCAGTTCACGATGTCGGGGTATACTCAACAACGATCCAGTGCAGTCATGATTACCAGCACCATCACTGTTGTACTTGTCAGCACAGTGGTATTTGGTATGATGACTAAGCCACTGATAAGGTTCTTGCTACCTCATTCTAAACGCAAAAACAGTATGCAAAACATGAATGACCATGTAACTTGTTCTCCAACAAAATCATCAATGAATGTACCATTTCTTGAAAATTCAGTATATAGTGAAGCTGATATTGATGAACTTCAACGTCCAAGTAGTCTTCGTGATTTACTATCAACTCCAACACACACTGTTCATTGCTTGTGGCGCAAGTTTGATAATGGATTTATGCGTCCAGTTTTTGGTGGCAGAGGTTTTGTTCCAATAGTTCCTACATCACCAATTCAAACCAATAATCTATTGTGA 1629 0.3751 MGFEFSHVLSKMQMLYMSDHGSVVSMNIFVALLCACIVLGHLLEEYRWINESITALLIGLCTGVVILMFSGGKSSHLLIFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIVMFGAVGTLICWTIITVGAIQIFKRMGIHSLELEDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIKSFDLNHIDSGVALQFLANFLYLFIASTMLGVLTGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMLAELCYLSGILTVFFCGIVMSHYTWHNVTESSRTTTKHSFATLSFVAETFIFLYVGMDALDIEKWRFVSDSPGTSIAVSSVLLGLILTGRAAFIFPLSFLSNLTKKSPNEKISFRQQVIIWWAGLMRGAVSIALAYNQFTMSGYTQQRSSAVMITSTITVVLVSTVVFGMMTKPLIRFLLPHSKRKNSMQNMNDHVTCSPTKSSMNVPFLENSVYSEADIDELQRPSSLRDLLSTPTHTVHCLWRKFDNGFMRPVFGGRGFVPIVPTSPIQTNNLL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0308 542 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 539 - -
Lan2g0308 542 Gene3D - 145 197 - -
Lan2g0308 542 PANTHER SODIUM/HYDROGEN EXCHANGER 7 539 IPR018422 GO:0006812|GO:0015299|GO:0016021
Lan2g0308 542 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 28 460 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lan2g0308 542 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lan2g0308 542 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lan2g0308 542 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lan2g0308 542 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Lan2g0308 542 Pfam Sodium/hydrogen exchanger family 30 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0308 Lan-Chr2 2670282 2676950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0308 5 540 Antiporters AT3G05030 72.222 0.0 799
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0308 - - gmx:100816746 833.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g0308 2 2670282 2676950 Lan8g0298 8 5086400 5090346 PCT
Lan2g0308 2 2670282 2676950 Lan20g0679 20 5381144 5386838 PCT
Lan8g0298 8 5086400 5090346 Lan2g0308 2 2670282 2676950 PCT
Lan20g0679 20 5381144 5386838 Lan2g0308 2 2670282 2676950 PCT