Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0307 ATGGAGTGCAATAAGGATGAAGCTACAAGGGCTAAGGAAATTGCTGAATGTAAAATGCAAAGTGGTGACTTTGTAGGGGCACTGAAGTTTGCTTCAAAAGCTAAACGACTCTTCCCTGACATTCAGAACATTGTTCAGATAATTACTGTATGTGAGGTTCACTGTGCTGCACAGAACAAAGCCTTTGGGTCTGACATGGACTGGTATGGAATTCTTCAAACTGAACGAGTGGCTGATGAAGCTACTGTAAAGAAACAGTACAGGAAGCTCGCACTACTTCTTCATCCTGACAAAAATAAATCTGTTGGTGCAGAGGCTGCTTTTAAGTTGATTGGGGAAGCTAACAGGGTCTTGAGCGACTGTGTGAAGCGTTCTTTATATGACAGAAGCTGTAGATTTTCAATTGGTACTGCAGCACCAAATCCTCCATCCCATAACTCGAATGGGAGCTCATTTGTGCCGAAACATGATGGGAATGCTAGAAATTCTCAGAGTACTTTTAATTCACACTCTTCGGATGCTCATCAGTGGGATGAAAAGCTGGCTTTCTGGACATCTTGCCAGCATTGTAGTACTAGGTACCAGTACTACAAAACAATTGTAAATGCAACCGTACGCTGTCAACAATGTTCTAAACCCTTTACAGCGCGTGATATGGGGTACCAGGGTGTGCCCCCGGGATACATGTGGACATCGTTCCATAAACAGAAAGAGGCTCCAAAGCACATGCCACCAAAAGCATCAGAAAGTAATGGTGGAAAAACTTGTGGTAGAGGGCAATCAGATAATTTTGTGCGGTCAAATCCTGTATCTATGTCAAAATGCACTGCTGGGGTTGATGGGCATCATAAAGATGGGTATGTGGCTTCAGGACGGACAAAGGCTGGTATTGGAACGTCTAAGGTTGCTGCACCCAAACCCAAGGAATCACAAACCTCGGCAAATGCTAGAAGTAAGAGAGCAAGGCAGTCAGAATTAGATTCTAGAGATGTTAACAATGTTGAAAATGGCAATGGCTTGAAAAATACCAATGTTCGAGAAAATGATAATGATCCTTCAGTAAATAATGCAGGAGTAAACCAAAGAAAAGCTTCCAAGGAAAAGCAGCATGTTCCGTTCACAGAAACTGCTCAAGATGGTGATTTTGCAAATCCTTCTAAAAGGCCACGACAATATGAATCATTTAACGCCCCTAAAGTGGAGAAAGGTGAGCATGATCATGTGCAAGTAAAGGAAGCATCCAAGTCAGATCGTGATGGTGGTAAGTCAAAGGCCGACAATTGCTCTGCAGTGAATTCAAATGTCTCTCCCCATCAAGAAATAATTTGTCCTGATCCAGACTTCAGTGATTTTGATAAGGATAAGGCAGAGGATTGTTTTGCTGCTAATCAATTCTGGGCCATTTATGATAATTCTGATAGCATGCCAAGATACTATGCTCTTGTCAAGAAAGTGTTCTCCCCTTTCAAGTTGCAGATTATTTGGTTGGAACCTGACCCAGATGATCAAGGTGAGATTAATTGGGATGATGCTGGTTTACCTGTGGGTTGTGGTAAGTTCAAACTTGGTAATTCTCAGAGAACTGCTGATCTTGCTATGTTCTCTCATCAGATGCATTGCATAAAAGGCAGTGGCAAAGGTTCTTATCTGGTATTTCCCAAGAAAAGAGAGACTTGGGCACTTTTCAGAGATTGGGATATTGGATGGAGTTCTAATCGAGAAAAGGATTCAGAATTTCAATTTGAATATGTGGAAGTCCTATCTGATTTTGATGAAAATGTTGGCATTGAAGTTGCGTATCTTGGCAGAGTAAAAGGGTTTGTTAGTCTTTTTCAGCAAACTGTGCAGAGTGGGATTAGCTTATTTCGTGTTCCACCTAATGAGCTATATAGGTTCTCACACCGGGTTCCTTCATATAAGATGACCGGTGATGAAAGGGAAGATGTTCCAAGAGGATCTTTTGAACTTGACCCTGCTGGCCTGCCTAGTAACCTTTTTGTAGTTGGTGATCCTTGTGATGTGAAAATGAAGGATGCAATGCTAAACAATGGTGTTAGTTGTTCACACCATGAATCCTCTAAATGTAAAGTGGAACAGGCTATGCCGAATGAAAGTCTTGACAAAGAGAAGTTACGTAAGAGTAATGATGCTGAAAGAGTATCGTCAATCCTTAGAAGATCACCAAGGTCAAAGAGAAAAGGTATGGGTAATGCTCAAGTAAGCTCTAGTGAATGTGTGATTATAGATGATGATGAAGATATTGATCACAAGGACTGTGGTCAACCTGAGGGAACTGCTGCTGCACATAAGGCTAATGAGAAGGTCAAGACACCACGGAAACAAGAAAAAAATAATTATGAAAGAGAGACATTGAAAGTCCGAAGGTCACCTAGAGACATAAGCAAGAAAAATGCTCGAGTAGATAAAGGCGAATGCACAACAAGCAAGGTGACTGACAATCATTCAAATGCCAACAAAAATATGAAGGAAAGCAGTTTTACTCAGTCTGGAGGAAGTGGTCATACACCTTTGACAAAAGCAGGTGAATGTGCAACAAGCAAGGTGGCTGATAATCATTCAAATGTCAACAAAAATGTGAAGGGCAATAGTTTTTCTAAGTCTGGAGGAAGTGTTCAATCACCTTTGAAAAAAGATTGTAATGTCGCAGAAGCATCACGGTATGACTTTAAGAAGGAAAAATCTGAAGAGAAGTTTCAGTGTGGTCAGATATGGGCAATATATGGGGATAAGGATAGGATGCCTGCTGTTTATGCTCAAATTAAGAAGATTGAATCTGCTCCTAACTTTAAGTTGCACGTGTCCCTACTTGAACCCTTCTCTTCACCAAAAGACTTCAAAAGAACAGTGTCTTGTGGCACCTTTGAAGTTAAAAAGGTCAAACCACAAATTCTTTCTCTCTCTGAATTCTCTCATCAACTAAAAGTTGAGCCTGTGGTAAATAATTTGTATGAAATTTACCCAAGAAAAGGTGAGGTTTGGGCTCTGTACAAGGATCAGAACTATGATTTGACTTGTTCCAAACCGGGGAGAGGTGAATGTCATATGGTAGAAGTATTAGCATATACTGACGAGATTATACAAGTTGTTATTCTGACGGCTGTTAGCAGCTCTCAGCCATTTTTCAGGGCTCCTAGAATCCAGAGATCTAAGGCTGGTGTAATTGAAATATTTAAAGAAGAGGTTGGTAGATTTTCTCATCAGATTCCTGCTATTCGGCACAGTGGAGAAGACAATGTTCACCTCAGAGGATGTTGGGAGCTTGATCCTGCTTCAATCCCTGGTTTTATCTGA 3312 0.4097 MECNKDEATRAKEIAECKMQSGDFVGALKFASKAKRLFPDIQNIVQIITVCEVHCAAQNKAFGSDMDWYGILQTERVADEATVKKQYRKLALLLHPDKNKSVGAEAAFKLIGEANRVLSDCVKRSLYDRSCRFSIGTAAPNPPSHNSNGSSFVPKHDGNARNSQSTFNSHSSDAHQWDEKLAFWTSCQHCSTRYQYYKTIVNATVRCQQCSKPFTARDMGYQGVPPGYMWTSFHKQKEAPKHMPPKASESNGGKTCGRGQSDNFVRSNPVSMSKCTAGVDGHHKDGYVASGRTKAGIGTSKVAAPKPKESQTSANARSKRARQSELDSRDVNNVENGNGLKNTNVRENDNDPSVNNAGVNQRKASKEKQHVPFTETAQDGDFANPSKRPRQYESFNAPKVEKGEHDHVQVKEASKSDRDGGKSKADNCSAVNSNVSPHQEIICPDPDFSDFDKDKAEDCFAANQFWAIYDNSDSMPRYYALVKKVFSPFKLQIIWLEPDPDDQGEINWDDAGLPVGCGKFKLGNSQRTADLAMFSHQMHCIKGSGKGSYLVFPKKRETWALFRDWDIGWSSNREKDSEFQFEYVEVLSDFDENVGIEVAYLGRVKGFVSLFQQTVQSGISLFRVPPNELYRFSHRVPSYKMTGDEREDVPRGSFELDPAGLPSNLFVVGDPCDVKMKDAMLNNGVSCSHHESSKCKVEQAMPNESLDKEKLRKSNDAERVSSILRRSPRSKRKGMGNAQVSSSECVIIDDDEDIDHKDCGQPEGTAAAHKANEKVKTPRKQEKNNYERETLKVRRSPRDISKKNARVDKGECTTSKVTDNHSNANKNMKESSFTQSGGSGHTPLTKAGECATSKVADNHSNVNKNVKGNSFSKSGGSVQSPLKKDCNVAEASRYDFKKEKSEEKFQCGQIWAIYGDKDRMPAVYAQIKKIESAPNFKLHVSLLEPFSSPKDFKRTVSCGTFEVKKVKPQILSLSEFSHQLKVEPVVNNLYEIYPRKGEVWALYKDQNYDLTCSKPGRGECHMVEVLAYTDEIIQVVILTAVSSSQPFFRAPRIQRSKAGVIEIFKEEVGRFSHQIPAIRHSGEDNVHLRGCWELDPASIPGFI* 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0307 1103 MobiDBLite consensus disorder prediction 253 274 - -
Lan2g0307 1103 MobiDBLite consensus disorder prediction 854 881 - -
Lan2g0307 1103 MobiDBLite consensus disorder prediction 816 842 - -
Lan2g0307 1103 Gene3D DnaJ domain 64 179 IPR036869 -
Lan2g0307 1103 CDD DnaJ 67 120 IPR001623 -
Lan2g0307 1103 Pfam DnaJ domain 67 128 IPR001623 -
Lan2g0307 1103 Pfam Domain of unknown function (DUF3444) 886 1083 IPR024593 -
Lan2g0307 1103 Pfam Domain of unknown function (DUF3444) 439 645 IPR024593 -
Lan2g0307 1103 MobiDBLite consensus disorder prediction 758 815 - -
Lan2g0307 1103 MobiDBLite consensus disorder prediction 138 171 - -
Lan2g0307 1103 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lan2g0307 1103 PANTHER - 778 1101 - -
Lan2g0307 1103 PANTHER - 1 674 - -
Lan2g0307 1103 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 674 - -
Lan2g0307 1103 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 778 1101 - -
Lan2g0307 1103 SUPERFAMILY Chaperone J-domain 63 131 IPR036869 -
Lan2g0307 1103 MobiDBLite consensus disorder prediction 758 882 - -
Lan2g0307 1103 MobiDBLite consensus disorder prediction 305 319 - -
Lan2g0307 1103 MobiDBLite consensus disorder prediction 691 742 - -
Lan2g0307 1103 MobiDBLite consensus disorder prediction 237 431 - -
Lan2g0307 1103 MobiDBLite consensus disorder prediction 394 424 - -
Lan2g0307 1103 MobiDBLite consensus disorder prediction 330 362 - -
Lan2g0307 1103 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lan2g0307 1103 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lan2g0307 1103 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lan2g0307 1103 MobiDBLite consensus disorder prediction 691 725 - -
Lan2g0307 1103 SMART dnaj_3 66 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0307 Lan-Chr2 2638410 2644236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0307 4 216 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.364 8.86e-23 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0307 - - lang:109332665 2238.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0509 4 7708004 7711592 Lan2g0307 2 2638410 2644236 LSH
Lan2g0307 2 2638410 2644236 Lan8g0300 8 5098882 5101475 PCT
Lan8g0300 8 5098882 5101475 Lan2g0307 2 2638410 2644236 PCT