Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0297 ATGATTTGTTGTTTTCATTGCATGTGGAGTATAAGCATTGAGTTTTTTGTTTTCACTTGGAACAGAATGGATCATCAAGGGCATGGCCAGAACCCAAATATGGGGGTTATCGGTAGCGGAGCTCAACTCTCTTACGGTTCTAATCCTTATCAGCAAAGCCAAATGACTGGAGCCCCAGGGTCAGTTGTTACATCTGCTGGGAACATGCAATCCATCGGTCAACCTGCTGGAGCTCAGCTGGGACAACATCAACTTGCTTATCAGCATATTCACCAGCAACAACAGCAGCAACTTCAGCAACAGCTCCAACAGTTTTGGGCAACTCAATACCAAGAGATTGAGAAAGTTACCGATTTCAAAAATCACAGCCTTCCCCTGGCAAGGATCAAGAAGATTATGAAAGCAGATGAGGATGTCCGAATGATATCAGCTGAGGCACCAGTCATATTTGCAAGGGCATGCGAAATGTTCATATTAGAGTTAACCCTGCGCTCCTGGAATCACACTGAAGAGAACAAAAGGAGAACCCTTCAAAAGAATGACATTGCTGCAGCAATCACAAGGACTGATATCTTTGATTTCTTGGTTGACATTGTGCCTCGTGAGGACTTGAAAGATGAAGTTCTCGCATCAATACCCAGAGGAACAATGCCTGTTGCAGGGCCTGCTGATGCACTTCCATATATGTATATGCAACCTCAGCATGCACCCCAAGCAGGAGCGCCGGGTGTCATAATGGGCAAACCTGTGATGGATCCAAACATGTATGCTCAGCAGCCTCATCCCTATATGGTACCACAAATGTGGCCACAGCCACAAGACCAACGACCATCATCTCCAGATCATTAG 849 0.457 MICCFHCMWSISIEFFVFTWNRMDHQGHGQNPNMGVIGSGAQLSYGSNPYQQSQMTGAPGSVVTSAGNMQSIGQPAGAQLGQHQLAYQHIHQQQQQQLQQQLQQFWATQYQEIEKVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLVDIVPREDLKDEVLASIPRGTMPVAGPADALPYMYMQPQHAPQAGAPGVIMGKPVMDPNMYAQQPHPYMVPQMWPQPQDQRPSSPDH* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0297 282 Gene3D Histone, subunit A 85 201 IPR009072 GO:0046982
Lan2g0297 282 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 23 282 - -
Lan2g0297 282 Pfam Core histone H2A/H2B/H3/H4 89 186 IPR007125 GO:0003677
Lan2g0297 282 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 23 282 - -
Lan2g0297 282 SUPERFAMILY Histone-fold 77 195 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0297 Lan-Chr2 2527061 2528465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0297 23 269 CCAAT-HAP5 Transcription Factor Family AT1G08970 63.306 8.41e-88 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Lan2g0297 CBFD_NFYB_HMF 6.7e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0297 K08066 - gmx:100527803 410.994