Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lan2g0281 | ATGAGTAGCCGCTCAAGTCGAATAATTTATGTTGGCAATCTTCCTGGTGATATTCGCTTGAGGGAAGTAGATGATCTTTTCCACAAGTTTGGTCCTATTGTTGATATTGATTTGAAGATTCCGCCAAGACCACCAGGTTATGCTTTTGTGGAGTTTGAGGATGCTCGTGATGCTGAAGATGCAATTTATTATCGAGATGGTTACAAATTTGATGGTCAACGGTTGAGAGTTGAACTTGCACATGGTGGACGAGGACATTCATCATCTGTAGAACGTTACAGTAGTTATAGTGGTAGCAGTGGTAGCCGAGGAATTTCTAGGCGTTCTGATTATCGTGTTCTGATCACTGGATTACCTCCTTCAGCTTCTTGGCAAGATCTTAAAGATCACATGCGTAAAGCTGGTGACGTATGTTTCTCTCAAGTCTTCCGTGAACGTGGTGGCATGACTGGGATAGTGGACTATACGAACTATGATGATATGAAATATGCTATTAGAAAACTTGATGACTCAGAATTCCGAAATGCCTTTTCTCGCTCATACGTACGGGTGAGGGAATATGATCGACGTAGTTATTCTAGGAGTCCTAGTCGTGATTCTAGGGGGAGCTATTCTAGAAGCCCTAGCCGCAGTCCGTATATGTCACGCAGTCGAAGCCGCAGTCATAGTCATAGCTATAGTGACAGGAGCAGAAGCTTCTCTCCAAAAGCAAAACGCTCCCTGCGGTCTGTATCTCTTTCAAGATCCTTATCAAGATCCAGATCTCCAAATTCATCTCCTCCCCCTCGCAAGAGCCGCAGTCCCAGCCGAAGCCCAAGAAGAAATGTGTCACAATCTCGTTCACCTTCGGTGAGATCTGAACGCAGGGGATCTGTTAACTCTGGAGAGAGCAATTGA | 897 | 0.4482 | MSSRSSRIIYVGNLPGDIRLREVDDLFHKFGPIVDIDLKIPPRPPGYAFVEFEDARDAEDAIYYRDGYKFDGQRLRVELAHGGRGHSSSVERYSSYSGSSGSRGISRRSDYRVLITGLPPSASWQDLKDHMRKAGDVCFSQVFRERGGMTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRSYVRVREYDRRSYSRSPSRDSRGSYSRSPSRSPYMSRSRSRSHSHSYSDRSRSFSPKAKRSLRSVSLSRSLSRSRSPNSSPPPRKSRSPSRSPRRNVSQSRSPSVRSERRGSVNSGESN* | 299 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lan2g0281 | 298 | MobiDBLite | consensus disorder prediction | 88 | 104 | - | - | |
Lan2g0281 | 298 | MobiDBLite | consensus disorder prediction | 187 | 298 | - | - | |
Lan2g0281 | 298 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 111 | 189 | IPR000504 | GO:0003723 | |
Lan2g0281 | 298 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 9 | 76 | IPR000504 | GO:0003723 | |
Lan2g0281 | 298 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 113 | 175 | IPR000504 | GO:0003723 | |
Lan2g0281 | 298 | PANTHER | SERINE/ARGININE RICH SPLICING FACTOR | 2 | 278 | - | - | |
Lan2g0281 | 298 | Gene3D | - | 1 | 109 | IPR012677 | - | |
Lan2g0281 | 298 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 7 | 82 | IPR000504 | GO:0003723 | |
Lan2g0281 | 298 | SUPERFAMILY | RNA-binding domain, RBD | 5 | 176 | IPR035979 | GO:0003676 | |
Lan2g0281 | 298 | MobiDBLite | consensus disorder prediction | 271 | 298 | - | - | |
Lan2g0281 | 298 | MobiDBLite | consensus disorder prediction | 197 | 220 | - | - | |
Lan2g0281 | 298 | CDD | RRM1_SF2_plant_like | 8 | 79 | - | - | |
Lan2g0281 | 298 | SMART | rrm1_1 | 112 | 183 | IPR000504 | GO:0003723 | |
Lan2g0281 | 298 | SMART | rrm1_1 | 8 | 78 | IPR000504 | GO:0003723 | |
Lan2g0281 | 298 | MobiDBLite | consensus disorder prediction | 237 | 260 | - | - | |
Lan2g0281 | 298 | Gene3D | - | 110 | 188 | IPR012677 | - | |
Lan2g0281 | 298 | CDD | RRM2_SF2_plant_like | 111 | 186 | - | - | |
Lan2g0281 | 298 | PANTHER | PRE-MRNA-SPLICING FACTOR SF2-LIKE PROTEIN | 2 | 278 | - | - | |
Lan2g0281 | 298 | MobiDBLite | consensus disorder prediction | 221 | 235 | - | - | |
Lan2g0281 | 298 | MobiDBLite | consensus disorder prediction | 84 | 104 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lan2g0281 | Lan-Chr2 | 2383810 | 2389699 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lan2g0281 | 9 | 80 | Eukaryotic Initiation Factors Gene Family | AT3G11400 | 36.000 | 3.40e-06 | 45.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lan2g0281 | K12890 | - | gmx:100794282 | 316.62 |