Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0280 ATGATGATGATGACAATGGAGGGTATGATGGATAAGAGTGTATTAGATGATGTGATAAGAAGATTATTGGAAGGGAAAGGAGGGAAACAAGTGCAGTTATCTGAGTCTGAGATTCGTCAACTTTGTGTTAATGCTAGACAAATCTTTCTATCTCAGCCTATTCTCCTTCACCTTACTGCTCCTATTCGCCTTTGTGGTGATATACACGGTCAGTACCAAGACTTACTAAGGCTTTTTGAATATGGAGGCTATCCTCCTGCTGCAAACTACTTGTTCCTGGGGGATTATGTAGACAGAGGGAAGCAAAGTTTGGAGACTATATGTTTGCTTTTGGCCTACAAAATAAGGTATCCGGATAAAATTCATCTCTTGAGAGGAAACCACGAAGACGCAAAGATAAACCGGATATATGGTTTTTATGATGAATGTAAAAGGAGGTTCAATGTTAGGCTATGGAAGATATTTACCGACTGCTTTAACTGTTTGCCAGTGGCTGCACTCATTGATGGCAAAATACTTTGTATGCATGGAGGTCTCTCTCCAGAATTACAAAATTTGAATCAGATAAAGGAGATTCAAAGGCCTACTGAAATTCCAGATAATGGTCTCCTATGTGATCTGCTTTGGTCTGATCCTGATTCTAGCATTGACGGCTGGGCGGATAGTGACCGAGGCGTTTCATGTACTTTTGGATCTGATGCAGTCACAGAGTTTTTGGATAAAAATGACCTTGATCTCATTTGCAGAGGTCATCAGGTTGTAGAGGATGGATATGAGTTTTTCGCTAAACGAAGATTGGTCACAATATTTTCTGCTCCGAATTATGGTGGGGAGTTTGATAATGCTGGTGCGTTATTGAGTGTCGATGAATCTCTTGTGTGTTCCTTTGAGATATTAAAACCTATTGATAGAGGATCTTCATCGAAGATGAATCTTAAGAAGCCCCCTAAACTTGGAAAGGCTTAG 966 0.4017 MMMMTMEGMMDKSVLDDVIRRLLEGKGGKQVQLSESEIRQLCVNARQIFLSQPILLHLTAPIRLCGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKIHLLRGNHEDAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDGKILCMHGGLSPELQNLNQIKEIQRPTEIPDNGLLCDLLWSDPDSSIDGWADSDRGVSCTFGSDAVTEFLDKNDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEILKPIDRGSSSKMNLKKPPKLGKA* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0280 321 Pfam Calcineurin-like phosphoesterase 62 253 IPR004843 GO:0016787
Lan2g0280 321 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2 317 - -
Lan2g0280 321 Pfam Serine-threonine protein phosphatase N-terminal domain 15 58 IPR031675 -
Lan2g0280 321 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP1 ISOZYME 8 2 317 - -
Lan2g0280 321 SMART pp2a_7 33 303 IPR006186 GO:0016787
Lan2g0280 321 ProSitePatterns Serine/threonine specific protein phosphatases signature. 124 129 IPR006186 GO:0016787
Lan2g0280 321 PRINTS Serine/threonine phosphatase family signature 61 88 IPR006186 GO:0016787
Lan2g0280 321 PRINTS Serine/threonine phosphatase family signature 90 117 IPR006186 GO:0016787
Lan2g0280 321 PRINTS Serine/threonine phosphatase family signature 123 147 IPR006186 GO:0016787
Lan2g0280 321 PRINTS Serine/threonine phosphatase family signature 157 183 IPR006186 GO:0016787
Lan2g0280 321 PRINTS Serine/threonine phosphatase family signature 186 213 IPR006186 GO:0016787
Lan2g0280 321 PRINTS Serine/threonine phosphatase family signature 243 263 IPR006186 GO:0016787
Lan2g0280 321 PRINTS Serine/threonine phosphatase family signature 265 281 IPR006186 GO:0016787
Lan2g0280 321 Gene3D - 7 311 IPR029052 -
Lan2g0280 321 CDD MPP_PP1_PPKL 14 301 - -
Lan2g0280 321 SUPERFAMILY Metallo-dependent phosphatases 10 304 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0280 Lan-Chr2 2378816 2381787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0280 40 249 Calmodulin-binding Proteins AT5G63870 30.000 1.10e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0280 K06269 - gmx:100805030 615.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0886 4 10824620 10827419 Lan2g0280 2 2378816 2381787 LSH
Lan2g0280 2 2378816 2381787 Lan16g1045 16 17658320 17659942 LSH