Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0276 ATGCCTGTGGCAGATGATGCTCAGAGGAATAAGAGACTTGCCATAATTGGGGTCTCAACATTCTTATTGGTGGCTATGGTAATAGGTGTAACCGTTACTATCAGCTCCAATAAGAATGTGATCGATGAAGAAGATCCAAAAGATAATAGCAAATCTCATGTTTCATCCACAATGAAAGCTGTTATATCTCTTTGTCAACCCACAGATTATAGAGAAGAATGTGTAAACGATCTTTCTAAGGAAGCTGGAAATACCACTGACCCAAGAGAGCTTATACAAATTGCATTCCAAATAACCATTAACAGAATTGGTGAGGGACTTAAGAAAACAAATATTTTGCAAGAGGTTGAGAAAGACCCTAGGGCTAAGGGGGCTCTTGTTACATGCAAACAACTCATGGATCTTTCTGTTGGAGAGTTTAATAGGTCACTTGACAAATTGGGCAAGTTTAATCTCAACAACCTTGACAATATCCTCACAAGTTTGAAGGTTTGGCTTAGTGGTGCAGTTACATACCAAGAGACTTGTTTGGATGCATTTGAGAACACCACTTCTGAAGCTGGTAATAAAATGAAGGAAATATTGCAAACTTCTATGCACATGAGCAGCAATGGTCTTGCCATAATCAATGAGCTTTCTAAAACTCTAGCATCTTTGCATATCACAAAAACTTCCGGCCGCCGTCTCCTCCAGGATGCTGATGATTTACCGGTTCTTGGTCACGGTGATGATGACCTTCCTGAATGGGTTGAGGATGGTGTTGGTGTTCGTAGACTTCTTAAAATGAATGCAAGAAAATACATGGCTAATGTCATTGTTGCCAAAGATGGTAGTGGAAATTTCACCAAAATTAGTGAGGCATTGAAGCTTGTTCCTAAGAAGAATCAAAAGTCATTCATTATATGGATCAAGGAAGGTGTTTATCATGAGTATGTACATGTCACTAAGGATATGACTCATGTTGTGTTTGTTGGTGATGGTGCCAAAAAGACAAGGATCACTGGTAACAAGAATTTCATTGATGGAATTAACACTTACAATACAGCTACTGTTGCTGTTCAAGGAGATTACTTTGTTGGCATTGGTGTTGGGTTTGAGAACTCTGCTGGTGCACACAAACATCAAGCAGTTGCATTAAGAGTTCAAGCTGATAAATCCATCTTCTACAAATGCAGAATGGATGGGTTCCAAGACACACTTTATGCACATGCATTGCGTCAATTCTATAGAGATTGCACTATTTCAGGTACCATTGACTTTGTCTTTGGTGATGCAGTTGCTGTTTTCCAAAACTGCACTTTTGTTGTCCGAAAACCAATGCAAAACCAGCAATGCATTGTCACAGCACAAGGCAGAAAAGAAAGGTACCAACCATCAGGAATAATCATCCAAGGTGGTTCAATTGTTGCAGACCCAAAGTACTACCCAGTGAGATTTGATAACAAAGCTTACTTAGCACGTCCATGGAAGAATTTCTCAAGAACTGTTTTCTTGGAAACTTACATTGGTGATTTAATCCAACCAGATGGATTTATGCCATGGCAAACAGCAACAGGAATTCCTACAAATACAGACACATGTTTCTATGCTGAGGTTAATAATCGTGGACCCGGTGCAGACATAACCAAACGTGTTAAATGGGAAGGTGTTAAGAAACTTACACCACAAATAGCAACTAGTTTCTTTCCATCCAAGTTTTTCCATGGTGATGATTGGATTAGGGTTACTAAAATTCCTTACTTTTCTGGTGAGAAAACTTCCAAGGAATAG 1770 0.3921 MPVADDAQRNKRLAIIGVSTFLLVAMVIGVTVTISSNKNVIDEEDPKDNSKSHVSSTMKAVISLCQPTDYREECVNDLSKEAGNTTDPRELIQIAFQITINRIGEGLKKTNILQEVEKDPRAKGALVTCKQLMDLSVGEFNRSLDKLGKFNLNNLDNILTSLKVWLSGAVTYQETCLDAFENTTSEAGNKMKEILQTSMHMSSNGLAIINELSKTLASLHITKTSGRRLLQDADDLPVLGHGDDDLPEWVEDGVGVRRLLKMNARKYMANVIVAKDGSGNFTKISEALKLVPKKNQKSFIIWIKEGVYHEYVHVTKDMTHVVFVGDGAKKTRITGNKNFIDGINTYNTATVAVQGDYFVGIGVGFENSAGAHKHQAVALRVQADKSIFYKCRMDGFQDTLYAHALRQFYRDCTISGTIDFVFGDAVAVFQNCTFVVRKPMQNQQCIVTAQGRKERYQPSGIIIQGGSIVADPKYYPVRFDNKAYLARPWKNFSRTVFLETYIGDLIQPDGFMPWQTATGIPTNTDTCFYAEVNNRGPGADITKRVKWEGVKKLTPQIATSFFPSKFFHGDDWIRVTKIPYFSGEKTSKE* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0276 589 SMART PMEI_2 56 208 IPR006501 GO:0004857
Lan2g0276 589 CDD PMEI-like_3 63 214 - -
Lan2g0276 589 Gene3D - 264 584 IPR012334 -
Lan2g0276 589 PANTHER PECTINESTERASE 13 586 - -
Lan2g0276 589 PANTHER PECTINESTERASE 13 586 - -
Lan2g0276 589 SUPERFAMILY Pectin lyase-like 269 582 IPR011050 -
Lan2g0276 589 Pfam Plant invertase/pectin methylesterase inhibitor 61 208 IPR006501 GO:0004857
Lan2g0276 589 ProSitePatterns Pectinesterase signature 2. 414 423 IPR033131 -
Lan2g0276 589 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 214 IPR035513 -
Lan2g0276 589 TIGRFAM PME_inhib: pectinesterase inhibitor domain 55 212 IPR006501 GO:0004857
Lan2g0276 589 Pfam Pectinesterase 270 570 IPR000070 GO:0030599|GO:0042545
Lan2g0276 589 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 61 213 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0276 Lan-Chr2 2358441 2361513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0276 5 583 Carbohydrate Esterase AT3G05610 46.816 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0276 K01051 - gmx:100801686 864.374
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0894 4 10877598 10886844 Lan2g0276 2 2358441 2361513 LSH
Lan2g0276 2 2358441 2361513 Lan8g0331 8 5352778 5355697 PCT