Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0275 ATGGGGCATTTATCCTCTATGTTGAATGGGTTGGCGAGGTCGTTTTCGACGAAAAAGGGAAGAAGTTCTAGGAGGCATGGTGAGAGAGAAGCTGCTGAAGCAATGGAAAAATCTGCTAAGAAAAATGACTTGATATTATGTAGCTCAGGCACTGTTAATGTAGATGGTTCAAACAACTTTGCCTCAGTTTTCTCCAAGAGAGGCAAGAAAGGAGTGAACCAAGATTGCTGCATAGTGTGGGAGGAATTTGGATGCCAAAAGGACATGATCTTTTGTGGAATTTTTGATGGGCATGGACCATGGGGTCACTTTGTGTCTAAAAGAGTAAGAAAATCAATGCCATCAACTTTGCTATGTAACTGGCAAGAGACAATTGCTCAAACTTCACTTGATTCAGATTCTGGTATAGATTATGAGAAGAAGGAACATCAATTTAATATATGGAAACATTCTTACTTGAAAACTTGTTCTGCCATTGATCAAGATCTCGAGCATTATCGCAAGATAGACTCGTTTTACAGCGGAACTACTGCCCTCTCAATTGTTAGACAGGGTGAACTCATGGTGATAGCAAATGTTGGTGACTCCCGTGCTGTGTTAGCAACAAAATCAGATGATGGGAATGTCGTACCAGTTCAGCTAACAATTGATTTCAAGCCCAACTTACCTGAGGAGGCAGAGAGAATAAATCAGTGTCAAGGAAGGGTGTTGAGCTTGGATGATGAGCCAGGGGTGCATAGGGTGTGGTTGCCTGATGAAGAGTCTCCAGGACTAGCCATGTCAAGAGCTTTTGGAGACTATTGCATCAAAGACTATGGTCTTATTTCTGTGCCTGAGGTAACACAATGGACTATAAGCAGCAGAGACCAGTTTGTTCTGCTTGCTACTGATGGGGTTTGGGATGTAATCTCCAATGAAGAAGCAATAGATATTGTATCTTCAACACAAGACAAATCAAAAGCAGCTAAGAATCTAGTGGAGTGTGCAATGCATGCATGGAAAGGCAAGAGGAGGGGCATTGCCATGGATGACATTTCAGCTATTTGTCTCTTCTTTCACTCTTCCCATTCACATCACCAATTCCTAAAATAG 1092 0.4194 MGHLSSMLNGLARSFSTKKGRSSRRHGEREAAEAMEKSAKKNDLILCSSGTVNVDGSNNFASVFSKRGKKGVNQDCCIVWEEFGCQKDMIFCGIFDGHGPWGHFVSKRVRKSMPSTLLCNWQETIAQTSLDSDSGIDYEKKEHQFNIWKHSYLKTCSAIDQDLEHYRKIDSFYSGTTALSIVRQGELMVIANVGDSRAVLATKSDDGNVVPVQLTIDFKPNLPEEAERINQCQGRVLSLDDEPGVHRVWLPDEESPGLAMSRAFGDYCIKDYGLISVPEVTQWTISSRDQFVLLATDGVWDVISNEEAIDIVSSTQDKSKAAKNLVECAMHAWKGKRRGIAMDDISAICLFFHSSHSHHQFLK* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0275 363 Gene3D - 46 355 IPR036457 -
Lan2g0275 363 CDD PP2Cc 59 352 IPR001932 -
Lan2g0275 363 SMART PP2C_4 51 350 IPR001932 -
Lan2g0275 363 ProSiteProfiles PPM-type phosphatase domain profile. 60 352 IPR001932 -
Lan2g0275 363 PANTHER ALPHABET, ISOFORM E-RELATED 1 360 - -
Lan2g0275 363 Pfam Protein phosphatase 2C 81 330 IPR001932 -
Lan2g0275 363 MobiDBLite consensus disorder prediction 21 36 - -
Lan2g0275 363 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 360 - -
Lan2g0275 363 SUPERFAMILY PP2C-like 55 353 IPR036457 -
Lan2g0275 363 MobiDBLite consensus disorder prediction 16 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0275 Lan-Chr2 2347680 2351172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0275 1 353 PP2C-type Phosphatase Gene Family AT3G05640 70.141 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0275 - - gmx:100808955 595.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0898 4 10915252 10919816 Lan2g0275 2 2347680 2351172 LSH
Lan2g0275 2 2347680 2351172 Lan4g1298 4 21775657 21779352 PCT
Lan4g1298 4 21775657 21779352 Lan2g0275 2 2347680 2351172 PCT