Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0273 ATGATGAGTGGTAAAGGTGAATTGTTATTATCATCATCAAGAATGAAGTCACAGGCGCAGGTAGCGGCGGTTCCGCTGGGAACTTTGATTGGGCGTGAACTTAGAACTGATAAAGTTGAAAAACCTTTTGTTAAGTTTGGACAATCTGGTTTGGCAAAGAAAGGAGAAGATTACTTCCTTATCAAAACAGATTGCTATAGGGTTCCTGGAGATTTATCAACACTCTTTTCCGTCTTCGCGATCTTTGATGGGCATAATGGTATATCAGCTGCTATTTTCACGAAGGAAAACTTATTAAATAATGTTTTGAGTGCAATACCGCAAGATATCAGCAGGGATGCATGGCTTGAGGCCCTTCCTCGTGCTCTAGTTGCTGGTTTTGTGAAAACTGATATAGAATTTCAACAAAAAGGGGAAACATCTGGAACTACAGCTACATTGGTTGTGATTGATGAGTGGACTGTCACTGTTGCATCTGTTGGTGATTCCCGTTGCATATTAGATACCCAGGGAGGTGCAGTTTCTCTCCTGACAGTTGATCACAGACTAGAAGAAAATGAAGAAGAGAGGGCGCGTGTTACTGCCAGTGGTGGTGAAGTAGGAAGACTCAATGTATATGGAGGCAACGCGGTAGGGCCTCTTCGCTGCTGGCCAGGTGGATTGTGCTTATCTAGATCGATAGGTGACACTGATGTGGGAGAATTTATTGTGCCAATACCACATGTTAAGCAAGTGAAGGTTTCAAATTATGGTGGAAGACTTATTATAGCTTCTGATGGTATATGGGATGCTTTATCTAATGATTTGGCTGCCCAGTCATGTCGGGGTATACTGGCAGAGCTTGCTGCTAAGCTAGTGGTTAAGGAAGCTCTAAGGTCAAGAGGCCTGAAGGATGATACAACCTGCCTTGTTGTAGATATTATTCCTTCAGACCTTCCTGTATTACCACCTATTCCGGGAAAGAAACCTAGCATGCTAACCTCGCTTCTCTTTGGAAAGAAATCTGGGAACACTACAAACAAAAAGAAACCTAGTATGCTAACTTCGCTTCTCTTTGGAAAGAAATCTGGGAACACTACAAACAAAGCTGCTAATAAGCTTTCTTCTGTTGGTGTTGTGGAAGAGTTATTTGAAGAGGGCTCTGCAATGCTTGCTGAAAGGTTGGGGAAGGATTTTCCGTTTAATAAGAATTCTGGGACTTTTCGCTGTGCGGTTTGCCAAATGGATCAACCCCCTGGCGATGATTTATCAGTGAAGTCTGGGCCTTTTTTCTCTCCATCATCTAAGCCATGGGAAGGCCCTTTCTTCTGCACAAAATGTCAAAAGAAGAAAGATGCCATGGAAGGAAGGACTTCTGTCAAGAAGGGTAAATTACGGATTAGCCATGCGTTTCAACAAAATTGTAATTAA 1410 0.4255 MMSGKGELLLSSSRMKSQAQVAAVPLGTLIGRELRTDKVEKPFVKFGQSGLAKKGEDYFLIKTDCYRVPGDLSTLFSVFAIFDGHNGISAAIFTKENLLNNVLSAIPQDISRDAWLEALPRALVAGFVKTDIEFQQKGETSGTTATLVVIDEWTVTVASVGDSRCILDTQGGAVSLLTVDHRLEENEEERARVTASGGEVGRLNVYGGNAVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKVSNYGGRLIIASDGIWDALSNDLAAQSCRGILAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDLPVLPPIPGKKPSMLTSLLFGKKSGNTTNKKKPSMLTSLLFGKKSGNTTNKAANKLSSVGVVEELFEEGSAMLAERLGKDFPFNKNSGTFRCAVCQMDQPPGDDLSVKSGPFFSPSSKPWEGPFFCTKCQKKKDAMEGRTSVKKGKLRISHAFQQNCN* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0273 469 PANTHER ALPHABET, ISOFORM E-RELATED 15 341 - -
Lan2g0273 469 PANTHER ALPHABET, ISOFORM E-RELATED 338 454 - -
Lan2g0273 469 ProSiteProfiles PPM-type phosphatase domain profile. 35 307 IPR001932 -
Lan2g0273 469 CDD PP2Cc 53 307 IPR001932 -
Lan2g0273 469 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 338 454 - -
Lan2g0273 469 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 15 341 - -
Lan2g0273 469 SMART PP2C_SIG_2 60 307 IPR001932 -
Lan2g0273 469 SMART PP2C_4 33 305 IPR001932 -
Lan2g0273 469 Gene3D - 45 311 IPR036457 -
Lan2g0273 469 Pfam Protein phosphatase 2C 76 292 IPR001932 -
Lan2g0273 469 SUPERFAMILY PP2C-like 49 307 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0273 Lan-Chr2 2311327 2314787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0273 17 450 PP2C-type Phosphatase Gene Family AT1G09160 71.659 0.0 619
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0273 - - lang:109332291 923.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan14g0276 14 4011030 4015782 Lan2g0273 2 2311327 2314787 LSH
Lan2g0273 2 2311327 2314787 Lan20g0632 20 4987443 4990913 PCT
Lan2g0273 2 2311327 2314787 Lan4g1301 4 21804085 21806824 PCT
Lan20g0632 20 4987443 4990913 Lan2g0273 2 2311327 2314787 PCT
Lan4g1301 4 21804085 21806824 Lan2g0273 2 2311327 2314787 PCT