Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0272 ATGGGTACAGAACAAGTTTTTCCATTTTCTGTTGTATCTGTGGTTGAAGATGTTCTTCAACATCATGGTGGTAGATTGAGTGATGTTAACTTGGCTTCAAGAAAAGCTGAAGAAGCTTCATTGAGAAGGTATGAAGCAGCTGGTTGGCTGCGAAAAACAGTTGGTGTTGTTGGAGGGAAAGACTTGCCAGCTGAACCTTCTGAAGATGATTTCAGGCTTGGATTGCGTAGCGGGATTATCCTTTGCAATGTTCTTAATAGAATTCAACCCGGGGCAGTCATCAAGGTAGTTGAAGCCCCCAATGATTCTGTTCTTATTCCTGATGGGGCAGCTCTGTCAGCATTTCAATACTTTGAAAATGTAAGGAACTTTCTTGTAGCTGCAGAGGAAATGGGACTTCCCACCTTTGAAGCTTCTGATTTGGAACAGGGAGGAAAATCTTCAAGGGTAGTGAATTGTGTTTTAGCACTTAAGTCTTACGCTGAATGGAAGCAAGGTGGGAAACTTGGAATATGGAAATATGGTGGGATTGGAAGTTCAAAGCCACCTATCTCTGGGAAAACACTTTTGAGGAAAAACTCAGAACCATTCATGAAGAGTTTATGGACCATGCCATCAGGAGACAAGGATGTTATGAGTGATCACTCATCATACATCGATTCCGGTCATGATCGAAATGAAGGGAGTTCCTTTCCATCCTTACATTCATTAGTTCGCGAATATTTGTGTGACAAGAGGCCAGAAGAAATTCCCATGGTTGTGGAGTCCCTGCTTAGCAAAGTCGTGGAGGAGTTTGAACGTCGAATGCAAATCCAAAATGAAACGCTTAAAATGACTCAAGAAGAAAAGATACCTTCTGAAGTGGAATGTTCAATTTCGAAAGCTACTTCTGTTGATGAAGAGATGGAAGAAAAGGAAGATGCAGAGGAACTACAGGTTAAAGAGGAGTTAGAAGAGGAATCTTATGATACATACAACGACCACGATGAATCGAGTAGCCAGGACTTTAAGAAGCAAGAATTAGTGGAACAACAAACTAAAAGCATCCAGGAATTGAAAACTATAGTCTATGAAACAAAATCAGGAATGCAATTTCTGCAAAAGAGATACCAGGAGGAAGTCATCTATCTTAGTAAGCACTTGCATACCTTAGCTTCTGCTGCATCAGGATATCATAAAGTTCTTGAAGAAAACCGCAAGTTGTACAATCAAGTGCAGGACCTGAAAGGAAATATTCGGGTGTACTGCCGAGTTCGACCCTTCTTAGGTGACCAACCAAGCCATTATAGCTCTGTCAGCAATGTGGAGGAGGGAAGTATCTCAATCATGACACCTTCCAAATATGGCAAAGAAGGGAAGAAAACATTTAATTTCAATAGAGCTTTTGGTCCTTCTGCAACCCAAGCGGAAGTTTTCTCAGATATGCAGCCTCTGATTCGCTCTGTTCTAGATGGGTACAACATTTGTATATTTGCCTACGGCCAAACAGGATCAGGAAAAACACACACTATGTCTGGACCGAACGAACTTACTGAGGAAACATTAGGTGTCAACTACCGTGCATTGGGAGATCTTTTCCTTCTCTCAGAACAAAGGAAAGACACCATTTTCTATGATATCAGTGTTCAGATGCTTGAGATTTACAATGAGCAAGTCAGAGACCTATTAACCATGGACGGTGCTAACAAAAGATTAGAAATTCGCAACAGTACCCATGATGGCATTAACGTACCGGATGCAAACCTTGTTCCCGTTTCATCAACTACAGATGTCATAAATTTGATGAACTTGGGACATAAGAATCGGGCTGTTGGTTCTACTGCCATGAATGATCGCAGTAGTCGTTCTCACAGCTGCCTAACAGTTCATGTTCAAGGAAGGTACCTGACATCGGGAAGTACAATTCGCGGTAGTATGCATCTCGTTGATCTAGCAGGAAGTGAGAGGGCTGATAAATCTGAGGCCACAGGGGATAGACTTAAAGAGGCTCAACATATCAACAAGTCACTTTCTGCCTTAGGAGATGTAATTGCTTCCCTTGCCTCAAAGAACGCACATGTTCCCTACAGGAACAGTAAACTTACTCAACTGCTTCAGGATTCTCTTGGAGGACAAGCTAAGACACTCATGTTTGTTCATATTAGTCCGGAGCCAGAAGCTCTTGGAGAAACACTTAGTACACTGAAGTTTGCTGAAAGGGTTTCCACTATCGAACTTGGTGCGGCTCGAGTTAATAAAGATAATAATAACTCAGATGTCAAAGAGCTTAAAGAACAGATTTCTAGTCTGAAGGCAGCTTTGGCTCGGAAGGAAGGAGAACCAGAACGCTTTCAACAATCTGGCAATAGTAGTAGCCATGAAGCACCAAAGTTGAAATCTTATGGCTCTTCTCCTATAAGATTTGGCAGCCATAAGCCAAGAGATGATTCTAGTAGCCTAGAGGGACAGAAAAAGGACACATCAAAGCTGAAAAGAAGAAGCCTAGATATCCATGACATGTATAGAAATTCACCTCAATGGCCACATAGTGTGAATAATGTGACAAATGTAAAGGAAGATGATAAAGAATCATCAGCTTCTAGTGAATGGATTGATAAGATTATGATGAAAAGGAATGACAGTTTAACTAGTGATGATAGTCTAGTTGGACAATGGGATGCAGAAACTAAACAATTCTCTCCATTGTTAAGTCCTAGTTCACTTTCAGAGACTTCAAAAATGTGCCTTGAACCTTCTTTGCATGGCTATGATATGACCATTACTGATGAATCTGATGAACTTGATATTGCAACTAGTGATTCTTCAGAATCTGAGTTGAATTGGTTATCATCACATATACCTAAACCAACCACCATTTCAAATGGCTTACCTTCTAAACCAAAGAAATCATCAACTCAACCAAAACCATCAAGGATACCTGAACCAAGGACTATGATCCCATCATTAATTCCTACACCATCAAGGAAATATTCAACAGTAGTTAGTCAACCCAGAAAGCAAACAGGGTCAATTGATATAAAGAAAAGAACCAAGTAA 3036 0.4071 MGTEQVFPFSVVSVVEDVLQHHGGRLSDVNLASRKAEEASLRRYEAAGWLRKTVGVVGGKDLPAEPSEDDFRLGLRSGIILCNVLNRIQPGAVIKVVEAPNDSVLIPDGAALSAFQYFENVRNFLVAAEEMGLPTFEASDLEQGGKSSRVVNCVLALKSYAEWKQGGKLGIWKYGGIGSSKPPISGKTLLRKNSEPFMKSLWTMPSGDKDVMSDHSSYIDSGHDRNEGSSFPSLHSLVREYLCDKRPEEIPMVVESLLSKVVEEFERRMQIQNETLKMTQEEKIPSEVECSISKATSVDEEMEEKEDAEELQVKEELEEESYDTYNDHDESSSQDFKKQELVEQQTKSIQELKTIVYETKSGMQFLQKRYQEEVIYLSKHLHTLASAASGYHKVLEENRKLYNQVQDLKGNIRVYCRVRPFLGDQPSHYSSVSNVEEGSISIMTPSKYGKEGKKTFNFNRAFGPSATQAEVFSDMQPLIRSVLDGYNICIFAYGQTGSGKTHTMSGPNELTEETLGVNYRALGDLFLLSEQRKDTIFYDISVQMLEIYNEQVRDLLTMDGANKRLEIRNSTHDGINVPDANLVPVSSTTDVINLMNLGHKNRAVGSTAMNDRSSRSHSCLTVHVQGRYLTSGSTIRGSMHLVDLAGSERADKSEATGDRLKEAQHINKSLSALGDVIASLASKNAHVPYRNSKLTQLLQDSLGGQAKTLMFVHISPEPEALGETLSTLKFAERVSTIELGAARVNKDNNNSDVKELKEQISSLKAALARKEGEPERFQQSGNSSSHEAPKLKSYGSSPIRFGSHKPRDDSSSLEGQKKDTSKLKRRSLDIHDMYRNSPQWPHSVNNVTNVKEDDKESSASSEWIDKIMMKRNDSLTSDDSLVGQWDAETKQFSPLLSPSSLSETSKMCLEPSLHGYDMTITDESDELDIATSDSSESELNWLSSHIPKPTTISNGLPSKPKKSSTQPKPSRIPEPRTMIPSLIPTPSRKYSTVVSQPRKQTGSIDIKKRTK* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0272 1011 Coils Coil 391 411 - -
Lan2g0272 1011 MobiDBLite consensus disorder prediction 777 791 - -
Lan2g0272 1011 Pfam Kinesin motor domain 417 737 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan2g0272 1011 PANTHER KINESIN-LIKE PROTEIN KLP-3 6 1007 - -
Lan2g0272 1011 Gene3D - 27 175 IPR036872 -
Lan2g0272 1011 MobiDBLite consensus disorder prediction 318 336 - -
Lan2g0272 1011 Pfam Calponin homology (CH) domain 43 162 IPR001715 GO:0005515
Lan2g0272 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 367 737 IPR027417 -
Lan2g0272 1011 PRINTS Kinesin heavy chain signature 485 506 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan2g0272 1011 PRINTS Kinesin heavy chain signature 607 624 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan2g0272 1011 PRINTS Kinesin heavy chain signature 638 656 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan2g0272 1011 PRINTS Kinesin heavy chain signature 687 708 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan2g0272 1011 MobiDBLite consensus disorder prediction 294 336 - -
Lan2g0272 1011 MobiDBLite consensus disorder prediction 930 1011 - -
Lan2g0272 1011 Gene3D Kinesin motor domain 352 739 IPR036961 -
Lan2g0272 1011 Coils Coil 262 282 - -
Lan2g0272 1011 MobiDBLite consensus disorder prediction 933 971 - -
Lan2g0272 1011 ProSiteProfiles Calponin homology (CH) domain profile. 40 162 IPR001715 GO:0005515
Lan2g0272 1011 PANTHER KINESIN-LIKE PROTEIN KIN-14H 6 1007 - -
Lan2g0272 1011 MobiDBLite consensus disorder prediction 765 844 - -
Lan2g0272 1011 SUPERFAMILY Calponin-homology domain, CH-domain 43 174 IPR036872 -
Lan2g0272 1011 CDD KISc_C_terminal 409 739 - -
Lan2g0272 1011 MobiDBLite consensus disorder prediction 984 1001 - -
Lan2g0272 1011 MobiDBLite consensus disorder prediction 802 832 - -
Lan2g0272 1011 ProSiteProfiles Kinesin motor domain profile. 411 737 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan2g0272 1011 SMART kinesin_4 409 745 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lan2g0272 1011 Coils Coil 298 319 - -
Lan2g0272 1011 ProSitePatterns Kinesin motor domain signature. 637 648 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lan2g0272 1011 Coils Coil 746 773 - -
Lan2g0272 1011 SMART ch_5 42 160 IPR001715 GO:0005515
Lan2g0272 1011 MobiDBLite consensus disorder prediction 302 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0272 Lan-Chr2 2301709 2310078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0272 399 737 Calmodulin-binding Proteins AT5G65930 42.690 1.50e-74 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0272 K10406 - gmx:100799535 1415.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0904 4 11023248 11030950 Lan2g0272 2 2301709 2310078 LSH
Lan16g1039 16 17587757 17597635 Lan2g0272 2 2301709 2310078 LSH
Lan6g1599 6 23760389 23770727 Lan2g0272 2 2301709 2310078 LSH