LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan2g0271	ATGGAGGATTGGTCTTTTTTGGTCAATGCTGCAATCTGCAACAAAAGCCTTAAGACTCATAATCAGGTTCAATCTAAAAGTAGCTTCTGCATGCCCAGGTCATTTCAGCAGAAGGGTGGTGAAGGGGATTTTCAAGTTCTAGCTCAAATCACAAAGCGTAGATGTACTGAAAATTCAAACCTAGAAGAACTCTGCAGTGTGATTCAAAATGTGAGGTCTCTACTTCAAATGAAACCTAAAATCGAGCAACACTTGACACATTTAGTTCGAAGAATTGTACAAGAGGAGTTGGAAAGCCGAATACTACTCTTAAGACCAATCATTAACCAAACTGAAACATCCTTTAAGTTGGTTTTTAAGAATGAAGTGCCTCCAATATTTTTTACACAATCCAAGATCAATGCTAAAGATGACAAACCTATTGAAATTGCTCTATATGACACTATATCTAAGTCTATTGTCACTGAGGGTCCATTGTCTTCTATCAGAATAGAGATTTGTGTTCTTAATGGTGAGTTTGGTTCAAATGGTAGTGAGGATTGGAATTCAGATGAATTCAATGCCAAAATCTTAAGTCAAAGGAAAGGCAAAGAACATTTACTTAAAGGAGATAGGGTTATTACACTGAAAAATGGAGTTGGAATTATCAAGAACATTTCGTTCACTGATATCTCAAGGTGGATAAGAAGTGGACGTTTTAGGTTAGGAGCTAAAGTTTTTCAAAGAACTCTCAATGAAGCAAACATCAAAGAAGGTCGAAGTAAACCTTTTATGGTGAGGCATTACCGAAATGAGGCGCGCATGAAAAACCAATGTTCTTCATTGAATGATGAGGTATGGTGTCTGAAGATGATAAAAAGAAATGGAAAAATTCACCAGCAGCTATGCTCTAATGAAATAAATACTGTTAAGGATCTGTTGCAGTTGTACACAACCAACCAAGTTTCATTACAAAAGATAATTGGCAAGAATTCATGGGATTCAATTATTAAACAAGCTAAAGCTTGTCATATAGACAATGATAAATGGTACATCTATCACTCTTCTGCAGCAGAACAATCAATATCTCTTGTCTTCAATTGCATCTATGAGGTTGTGGAAGTGTCTTTTAATGGCCAAAATCCTTGTTCAATAGAATCTCTGAATTTGAAAGACAAGTTTTTGGTGGAAAGAGTGAAACAGCAAGCTTACACAAATGTGAAGGATAATCTGATTCCACTTGAGACAACAACTGATGGCTTGTTGGAAAATTTTGCTAGTGTACAACCTGTGCAACATAGTGCTATGGGTCAAGCTCTAGAGCAAGGCCAACTAGAAATGTTGCCAAATTTGTGTGAGCAAGGCACCTCAACATCACATGTTGGTGAAGCTGATGCACACAATTATGATCACCAAGGCACTGAGCAACTGCTAGAATTTGGAGAAATGTCATTTAACTGGGAAGAAATGATTGCAAGTTGTCTTTCTCCTCTTAATGGTGATGGATTATGA	1491	0.3689	MEDWSFLVNAAICNKSLKTHNQVQSKSSFCMPRSFQQKGGEGDFQVLAQITKRRCTENSNLEELCSVIQNVRSLLQMKPKIEQHLTHLVRRIVQEELESRILLLRPIINQTETSFKLVFKNEVPPIFFTQSKINAKDDKPIEIALYDTISKSIVTEGPLSSIRIEICVLNGEFGSNGSEDWNSDEFNAKILSQRKGKEHLLKGDRVITLKNGVGIIKNISFTDISRWIRSGRFRLGAKVFQRTLNEANIKEGRSKPFMVRHYRNEARMKNQCSSLNDEVWCLKMIKRNGKIHQQLCSNEINTVKDLLQLYTTNQVSLQKIIGKNSWDSIIKQAKACHIDNDKWYIYHSSAAEQSISLVFNCIYEVVEVSFNGQNPCSIESLNLKDKFLVERVKQQAYTNVKDNLIPLETTTDGLLENFASVQPVQHSAMGQALEQGQLEMLPNLCEQGTSTSHVGEADAHNYDHQGTEQLLEFGEMSFNWEEMIASCLSPLNGDGL*	497

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan2g0271	496	Pfam	Calmodulin binding protein central domain	274	336	IPR046830	-
	Lan2g0271	496	PANTHER	CALMODULIN-BINDING PROTEIN	58	454	-	-
	Lan2g0271	496	Pfam	Calmodulin binding protein C-terminal domain	342	401	IPR046829	-
	Lan2g0271	496	PANTHER	OS02G0177800 PROTEIN	58	454	IPR012416	GO:0005516
	Lan2g0271	496	Pfam	Calmodulin binding protein-like N-terminal domain	115	261	IPR046831	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan2g0271	Lan-Chr2	2270171	2290372	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan2g0271	84	400	Calmodulin-binding Proteins	AT5G26920	37.202	1.09e-61	206

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan2g0271	-		-	lang:109332264	997.267