LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan2g0270	ATGATGGTATCAAATAAGAAATTTCTCAAGGAGCATGAAAGTAGTGGCAAAATTCCAATTCAAAAGTCAAAAGGGAAACCTGTTGATGCTAAACAATCAATGAGTGATCTCAGAAATGTGATAAACGTACTATGCATGAATGAACACAACTCATTCGTGGAAACTTTTCTGAGAAGAGTGGTAAGAGAGGTGGTGGAACATAAAATCCAAGATTACCAATTACCAAGAACAAGGATTCATAATCAATCTGGTGCTAAACTCTTCCACTTGTGTTTTATAAATAAGTTGCCTGATAAAATTTTCACCCTTTGTAATATCATAGCAGAAGATAAATCACCCCTTCAAATTGCTCTATTTGATGTTAGCACTAACTCTATAGTCAATGATGGTCCACTCTCATCAATAAAGATAGAGATATGTGCCCTTAATGGTGACTTTGGAAGTGAGGATTGGACTGAAGAGGAATTCAATGCCAATGTCTTGAAAGAAAGAGAGGGTAAAGGGTTATTAGTGAATGGAGATAGGTTTATTACTCTAAAAAATGGTGTTGGTTTTATCACTAAAATGACCTTCACTGATAATTCAAGATGGTTAAGGAACAGAAAGTTCAGGTTAGGAGCCAAAGTTATGCAATCAACTTCCACTGGAACAAATATTAAGGAAGGTATAAGTGAAGCATTTGTGGTCAAAGACTACAGAGGAGAGTCATACAAGAAGCACTACCCTCCAGCTTTGGACGATGACATATGGCGCTTGGCGAAAATCGGCAAAAATGGAAAAATCCACATGCGCCTCGCTCTCCATGGAATTCACACTGTTAAGGATCTCTTGCAGTTATACACAATCAACCAATCTTTATTACATGAGAAGTTTGGCAAAATTTCAAAGAAGTTAAAGTTAGCAATTATTGAACATGCCAAGACTTGTGTGATAGATGATTACAAGCTTTATAGCTACCAAACAGAAGAACAACCAATAGGCCTTATATTCAATTCCATCTACAACCTTATGGAAGTTACATTTGATGGTCAAAATTATCATTCACCAAATACTCTCAGCCCAAGTGAGAAGAGTTTAGTGGAATTAGTGAAGCAAATTGCTTACAAAAATGTGAATAACTTGAAATCAATTGATGAAACTTCATTAAACTGCGTAAGACCCGCGACATGTCTAAGAGCATGTCAATCCTATGCTCAGGATCAAGTTCTGCAGCATATTAATATCTCTACAGCATATGATATATATCAACAAGAAACATGGTCATATAATAGTGAACCTTTCATCACTAGTTCATATATTGATGAAGGAGTACATGATTATCAAACTTATGTTGATCCTCTACCAGACCAAAGAGACATGTCTCAAAACAGCTATGTAGAAGATGATTTTTTCTCTGGAATGTACATTGAGGGAGATAATTGGAACCTCTATAACTCTTCAACTCCTGTGCTATATACCCTTTCTTTGGTTACTAGGTAG	1479	0.3597	MMVSNKKFLKEHESSGKIPIQKSKGKPVDAKQSMSDLRNVINVLCMNEHNSFVETFLRRVVREVVEHKIQDYQLPRTRIHNQSGAKLFHLCFINKLPDKIFTLCNIIAEDKSPLQIALFDVSTNSIVNDGPLSSIKIEICALNGDFGSEDWTEEEFNANVLKEREGKGLLVNGDRFITLKNGVGFITKMTFTDNSRWLRNRKFRLGAKVMQSTSTGTNIKEGISEAFVVKDYRGESYKKHYPPALDDDIWRLAKIGKNGKIHMRLALHGIHTVKDLLQLYTINQSLLHEKFGKISKKLKLAIIEHAKTCVIDDYKLYSYQTEEQPIGLIFNSIYNLMEVTFDGQNYHSPNTLSPSEKSLVELVKQIAYKNVNNLKSIDETSLNCVRPATCLRACQSYAQDQVLQHINISTAYDIYQQETWSYNSEPFITSSYIDEGVHDYQTYVDPLPDQRDMSQNSYVEDDFFSGMYIEGDNWNLYNSSTPVLYTLSLVTR*	493

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan2g0270	492	MobiDBLite	consensus disorder prediction	1	19	-	-
	Lan2g0270	492	Pfam	Calmodulin binding protein central domain	244	309	IPR046830	-
	Lan2g0270	492	MobiDBLite	consensus disorder prediction	1	31	-	-
	Lan2g0270	492	Pfam	Calmodulin binding protein-like N-terminal domain	89	231	IPR046831	-
	Lan2g0270	492	PANTHER	CALMODULIN-BINDING PROTEIN	2	479	-	-
	Lan2g0270	492	Pfam	Calmodulin binding protein C-terminal domain	315	376	IPR046829	-
	Lan2g0270	492	PANTHER	OS02G0177800 PROTEIN	2	479	IPR012416	GO:0005516

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan2g0270	Lan-Chr2	2264849	2268581	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan2g0270	53	382	Calmodulin-binding Proteins	AT5G26920	42.899	7.67e-88	274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan2g0270	-		-	gmx:100805759	545.043

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan16g1033	16	17553003	17557215	Lan2g0270	2	2264849	2268581	LSH