Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0252 ATGGGCGGAGGTGGAGTACCAACGACGGCGAACACGGAGGCGCAATACTCATCGGCGAAGACATCAGTTTGGTGGGACATAGAGAACTGTCACGTTCCTAAAGGTTCCGATCATCATGCCATTGCACAGAATATCAGTTCTGCACTTGTTAGGATGAACTATTGTGGCCCCGTTTCCATCTCCGCCTATGGTGACACTACTCGCATCCCCGCGTCTGTTCAACACGCGCTCTCTAGTACTGGCATCTCCCTTAACCATGTTCCTTCTGGTGTTAAGGATGCTAGTGACAAGAAGATTCTTGTCGACATGCTTTTCTGGGCAGTGGACAATCCTGCACCTGCTAATTATTTATTGATTTCGGGTGACCGAGACTTCTCTAACGCTCTCCATCAATTGCGGCTGAGGAGATATAATATTCTTCTCGCACAACCACAAAAGGCATCTGTGCCCCTAGTCGCAGCTGCTAAGAGTGTATGGCTTTGGACTAGTCTTCTAGCTGGAGGACCTCCTATAAGTGATGGCGTATCACAGCAACTTGGTAATAGTAACCTTGCATCGTCTTCCGAGACCTCCCAAATTCCAGTCACTAATGCTAGTCAGATGCATCAACAGGTGGATTCATATTCTGAAGTTCACACCAGAAATCAGAAATTTCCAAATGGAGGAAGAGGATTTGATTCTAGATATCAGGGGAAAACGAATTGGAGAACTCAGAGTCAACCAAATGGACCCAGGGCGATGAATCCACCTACAGTTGGACTTCAAGATAATCATAATAATATAAACTCTTATCAACCGGGCAACTTTAATCCAAATGTTCCCTTAAGTGGATCTGCTACAAATTATGTTCCTGGAAATACTGATCAGTCATGGAACAATAATGATAATCTACAGGGGGGCAATCAACAAAATCCTTATCCGCAGCCGCCAAGACCAGACAGTTATCCGATGCAACCTCCTTTTGAACCAAGTAATTCGTCTTCTCTAAATTCCCATACATTTGCAACTTCACCAGTACCACCTACGACTCTTGGTCCCAGTTTCACTGCAGGACCAATTACAAATGTGCCAGATATTGGTAATCTAAACATTTCTGGATATCACAATACTGCTCATAGTCCACGAAATGTTCAGCAACGGCGTGGAGAGTCGAAACAGAATCCTAACAGTAATGCTTCACAAAAAAGTAGACATAAAGTACATAGCAGTAGCAGCACAAAAAAGTTATACCAAAGCTATCCACATGGTCCAGAACCTACACCATTGACAGCAGTAGGTAATAATAACCTTCCTGGTAATGGTGCATGGGGATCTCCAGGGCTTCCAAAACCTTCCGAATATGTTCAAGGCCTTATAGGGGTTGTTTTACTTGCCTTGAATTCACTAAAAAACGAGAAGATTATGCCAACTGAGGCAAATATAACTGATTGCATCTGTTATGGAGATCCCAAACACAGCAACACCGACGTTAAGAAAGCTCTGGAGAGTGCTATTGAGCAGAAAATGGTGGTGAAACAGAATTTAGGTGCTTTGCAAATGTATATTGGTAAGAATGATAAACTATGGAAGTGTGTAAATCCTTTAGATGGTAATCCAAAGAAGCACACCAAAGAAACATGGGATGAAATTCAGAAATTTTTAACAACATCCTCTGGAAGATTGGCAATAATGGGTACTCAGTGCAAGTATGAAGCAGGTATTGTGATAAGGAATATGTGCTTTAAGGACCTTGCTCTGGGTGATGTTCTTCAGATATTGAACATGTTAGTTACCCATAAAAAATGGATTGTGCATCATCACTCTGGTTGGCAACCACTTAACATTTCTCTCCCTGAGTCAAACCCTGATTCAGTGGTCGTAGCTGGCACATAA 1872 0.4284 MGGGGVPTTANTEAQYSSAKTSVWWDIENCHVPKGSDHHAIAQNISSALVRMNYCGPVSISAYGDTTRIPASVQHALSSTGISLNHVPSGVKDASDKKILVDMLFWAVDNPAPANYLLISGDRDFSNALHQLRLRRYNILLAQPQKASVPLVAAAKSVWLWTSLLAGGPPISDGVSQQLGNSNLASSSETSQIPVTNASQMHQQVDSYSEVHTRNQKFPNGGRGFDSRYQGKTNWRTQSQPNGPRAMNPPTVGLQDNHNNINSYQPGNFNPNVPLSGSATNYVPGNTDQSWNNNDNLQGGNQQNPYPQPPRPDSYPMQPPFEPSNSSSLNSHTFATSPVPPTTLGPSFTAGPITNVPDIGNLNISGYHNTAHSPRNVQQRRGESKQNPNSNASQKSRHKVHSSSSTKKLYQSYPHGPEPTPLTAVGNNNLPGNGAWGSPGLPKPSEYVQGLIGVVLLALNSLKNEKIMPTEANITDCICYGDPKHSNTDVKKALESAIEQKMVVKQNLGALQMYIGKNDKLWKCVNPLDGNPKKHTKETWDEIQKFLTTSSGRLAIMGTQCKYEAGIVIRNMCFKDLALGDVLQILNMLVTHKKWIVHHHSGWQPLNISLPESNPDSVVVAGT* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0252 623 MobiDBLite consensus disorder prediction 364 411 - -
Lan2g0252 623 CDD PIN_limkain_b1_N_like 20 144 - -
Lan2g0252 623 MobiDBLite consensus disorder prediction 320 350 - -
Lan2g0252 623 Pfam OST-HTH Associated domain 560 613 IPR025677 -
Lan2g0252 623 MobiDBLite consensus disorder prediction 200 350 - -
Lan2g0252 623 Pfam NYN domain 20 156 IPR021139 GO:0004540
Lan2g0252 623 PANTHER LIMKAIN B LKAP 2 607 IPR024768 GO:0005777|GO:0010468|GO:1903231
Lan2g0252 623 Gene3D - 11 163 - -
Lan2g0252 623 MobiDBLite consensus disorder prediction 305 319 - -
Lan2g0252 623 MobiDBLite consensus disorder prediction 200 216 - -
Lan2g0252 623 MobiDBLite consensus disorder prediction 230 304 - -
Lan2g0252 623 PANTHER ACID BINDING PROTEIN, PUTATIVE-RELATED 2 607 - -
Lan2g0252 623 MobiDBLite consensus disorder prediction 364 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0252 Lan-Chr2 2091429 2094556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0252 10 221 C2H2 Transcription Factor Family AT5G61190 63.182 4.08e-83 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0252 - - gmx:100794608 989.949