LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan2g0234	ATGGAAGAAACATTTGTACCCTTAGAAGGAATCAAGAATGATCTAAGAGGAAGGTTAATGTGCTACAAGCAAGATTGGAAAGGTGGAATCAAAGCAGGCATAAGGATTTTGGCCCCCACCACATACATATTTTTTGCTTCTGCAATACCTGTCATTTCATTTGGTGAACAACTAGAGCGAGATACGGAGGGTGTTCTAACAGCTGTTCAAACCTTGGCATCGACTTCGATATGTGGCATTATACACTCTATCATTGGTGGTCAACCCTTACTGATTTTAGGAGTGGCAGAACCTACTGTGATCATGTACACATTCATGTTCAATTTTGCCAAAGAGAGACCCGAGTTGGGCCGGAATATGTTTCTCGCGTGGACTGGATGGGTATGTGTTTGGACATCACTGTTGCTGTTTCTATTCGCCATCTTAGGGGCTTGTTCCATAATCAATAGGTTTACACGTATTGCCGGAGAGTTGTTTGGTATGCTTATTGCAATGCTCTTCATGCAGCAAGCTATCAAAGGACTAGTGGATGAGTTTCGCATACCAAAGCGAGAAGATCCAACGTCAACCGAGTTTTTACCTTCTTGGAGGTTTTCTAATGGGATGTTTGCTTTAGTTCTTTCATTTGGCCTTCTCCTCACTGCATTAAAAAGTAGAAAGGCTAGGTCATGGCGCTATGGTAGTGGCTGGATTCGCAGCTTAATAGCTGACTATGGTGTGCCCCTTATGGTCCTAGTTTGGACCGGCGTGTCCTACATGCCATCTAAAAATGTTCCACATGGTATCCCAAGGCGTCTCTTTAGCCCAAATCCGTGGTCGCCTGGTGCATACGAGAATTGGACTGTTATTAAGGATATGATCAATGTTCCTGTCGTCTACATAATTGGCGCGTTTATCCCAGCAACCATGATTGCAGTGCTTTATTACTTTGATCACAGTGTGGCATCGCAGCTTGCGCAGCAGAAAGAGTTCAATTTGAGAAAGCCATCATCTTACCATTATGACTTGCTCCTTTTGGGTTTTTTGACTTTAATGTGTGGCCTTATCGGAATCCCTCCTTCAAATGGAGTCATACCGCAGTCACCTATGCACACCAAGAGTCTAGCAACTCTTAAACATCAGTTACTTCGTAATAGACTAATGTCAACGGCACGAAAAAGTATGAGAACGAATGCTAGTTTAGGACAGTTATACGGAAATATGCAAGAAGCGTACCATCAAATGCAGAGTCCTCTTATTTACCAGGACCCCTCTGCTAGAGCACAAGGACTAAAAGAATTAAAAGAATCAACCATTCAAGCAGCTACCAGTTTAGGAAACATGGACGCCCCGGTAGATGAGGCAATGTTCGATGTTGAGAAAGAAATAGACGATCTGCTACCTATCGAGGTAAAGGAACAACGTGTCAGTAATTTACTTCAATCAATAATGGTTGGAGGATGCGTTGCAGCCATGCCGTTCCTCAAGATGATCCCAACCTCAGTCCTTTGGGGCTACTTCGCCTTCATGGCTATTGAAAGTTTGCCAGGAAATCAGTTTTGGGAAAGGATCCTATTACTCTTCACTGCACCAAGCAGAAGATACAAGGTGCTAGAGGATTACCATGCTACTTTTGTGGAAACTGTCCCTTTCAAGACAATAGCAACATTCACCATTTTCCAAACACTTTATCTTTTTGTATGTTTCGGGCTAACTTGGGTTCCTATTGCCGGAGTCATGTTTCCTATGATGATCATGCTCTTAGTTCCTGTTAGACAATACTTTCTCCCGAAATTTTTCAAAGGCGTACACCTTCAAGACTTGGATGCAGCAGCATATGAAGAACAAACTGCTTTACCATTCAACCTTGCAACACAATCAGATTTTGGAGGTGGTGCTTCACAGATTGATGAAAGTGAGATCCTAGATGGTGTTATCACTAGAAGCCGTGGCGAGTTTAGGCGCACTAGCAGTTCAAAGATCACAAGCACCACTCCAACACCAGGAAATGATCTCAAGAGCCATCAGAGCCCACGTCTTTCGTTCAATTCTCGTGCTGGTGAGCTCACAACTGAACAGAGTCCTCGATCCGGCACCAGAAGTCTCTTCAGTCCAAATGGTAGAGAAGTAAGATTATCAAGCCTGGGAAGAAGCCCTCTTAACCCTGACTCAAAACAGCAAGACAACAAATAA	2172	0.4346	MEETFVPLEGIKNDLRGRLMCYKQDWKGGIKAGIRILAPTTYIFFASAIPVISFGEQLERDTEGVLTAVQTLASTSICGIIHSIIGGQPLLILGVAEPTVIMYTFMFNFAKERPELGRNMFLAWTGWVCVWTSLLLFLFAILGACSIINRFTRIAGELFGMLIAMLFMQQAIKGLVDEFRIPKREDPTSTEFLPSWRFSNGMFALVLSFGLLLTALKSRKARSWRYGSGWIRSLIADYGVPLMVLVWTGVSYMPSKNVPHGIPRRLFSPNPWSPGAYENWTVIKDMINVPVVYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTLMCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNRLMSTARKSMRTNASLGQLYGNMQEAYHQMQSPLIYQDPSARAQGLKELKESTIQAATSLGNMDAPVDEAMFDVEKEIDDLLPIEVKEQRVSNLLQSIMVGGCVAAMPFLKMIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPSRRYKVLEDYHATFVETVPFKTIATFTIFQTLYLFVCFGLTWVPIAGVMFPMMIMLLVPVRQYFLPKFFKGVHLQDLDAAAYEEQTALPFNLATQSDFGGGASQIDESEILDGVITRSRGEFRRTSSSKITSTTPTPGNDLKSHQSPRLSFNSRAGELTTEQSPRSGTRSLFSPNGREVRLSSLGRSPLNPDSKQQDNK*	724

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan2g0234	723	Gene3D	Helical hairpin bin	18	60	-	-
	Lan2g0234	723	MobiDBLite	consensus disorder prediction	645	723	-	-
	Lan2g0234	723	Pfam	HCO3- transporter family	202	373	IPR011531	GO:0006820\|GO:0016021
	Lan2g0234	723	Pfam	HCO3- transporter family	462	552	IPR011531	GO:0006820\|GO:0016021
	Lan2g0234	723	Pfam	HCO3- transporter family	8	180	IPR011531	GO:0006820\|GO:0016021
	Lan2g0234	723	MobiDBLite	consensus disorder prediction	649	701	-	-
	Lan2g0234	723	PANTHER	BORON TRANSPORTER 2-RELATED	1	701	-	-
	Lan2g0234	723	PANTHER	ANION EXCHANGE PROTEIN	1	701	IPR003020	GO:0005452\|GO:0006820\|GO:0016020

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan2g0234	Lan-Chr2	1918902	1923208	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan2g0234	1	689	Antiporters	AT3G62270	81.739	0.0	1154

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan2g0234	K24194		-	gmx:100776705	1293.49

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan4g0946	4	11857418	11861648	Lan2g0234	2	1918902	1923208	LSH

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