Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0218 ATGCCTCCCTCCGATTCTAATCTCAATCCCAAATGTTTTCTTTTTAATGCTGCTGCTGGTGCTTCTGCCGGAGTTATTGCTGCTACATTTGTGTGTCCTTTAGATGTAATCAAAACTAGGTTACAGGTTCATGGCCCACCCCACCTCCCTAATGCAACTGTTAAAGTTGGCAGTGTAATAATTGGTAGTTTGGAACAAATATTTCGCAAGGAGGGATTGCGTGGCATGTACCGTGGGCTTGCTCCTACTGTGCTGGCTTTAATTCCAAACTGGGCGGCTTATTTTACCATGTACGAACATCTCAAGAGCCTTCTTCTTTCTGATGATGGAAGTCATCATCTTCCTATTGGAGCTAATATGGTAGCTGCTTCCGGTGCTGGAGCTGCGACTATCATGTTTACAAATCCACTTTGGGTTGTGAAGACTAGACTCCAAACCCAAGGAATGAGACCTGGTGTTGTTCCATATAGAAGCACGCTATCTGCATTGAGAAGAATCGCACACGAGGAGGGCATTCGGGGGCTATACAGTGGCCTTGTACCTGCTTTGGCTGGTATCAGTCATGTTGCCATACAGTTTCCAACATATGAGACCATAAAATTTTATTTGGCAGATCAAGATGACTCAGCAGTGGATAAACTTGGTGCACGCGATGTTGCAATTGCCTCATCAGTCTCCAAAATATTTGCATCCACTTTGACATATCCCCATGAGGTTGTACGTTCCAGACTGCAAGAACAAGGGCACCACTCAGAGAAAAGGTACTCAGGTATGATCGACTGCGTTAGAAAGGTTTTTCAACAAGAGGGCATACCCGGTTTTTACCGAGGGTGCGCAACCAATCTTTTCAGAACAACACCAGCCGCCGTAATCACATTTACGAGCTTTGAAATGATACACCGTTTTCTAGTGTCAGTTTTTCCATCTGACCCACAGCCCAATATTTTGTGA 951 0.4479 MPPSDSNLNPKCFLFNAAAGASAGVIAATFVCPLDVIKTRLQVHGPPHLPNATVKVGSVIIGSLEQIFRKEGLRGMYRGLAPTVLALIPNWAAYFTMYEHLKSLLLSDDGSHHLPIGANMVAASGAGAATIMFTNPLWVVKTRLQTQGMRPGVVPYRSTLSALRRIAHEEGIRGLYSGLVPALAGISHVAIQFPTYETIKFYLADQDDSAVDKLGARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGMIDCVRKVFQQEGIPGFYRGCATNLFRTTPAAVITFTSFEMIHRFLVSVFPSDPQPNIL* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0218 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 104 IPR018108 -
Lan2g0218 316 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085
Lan2g0218 316 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Lan2g0218 316 PRINTS Mitochondrial carrier protein signature 79 99 IPR002067 GO:0055085
Lan2g0218 316 PRINTS Mitochondrial carrier protein signature 129 147 IPR002067 GO:0055085
Lan2g0218 316 PRINTS Mitochondrial carrier protein signature 223 245 IPR002067 GO:0055085
Lan2g0218 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 114 202 IPR018108 -
Lan2g0218 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 302 IPR018108 -
Lan2g0218 316 SUPERFAMILY Mitochondrial carrier 13 298 IPR023395 -
Lan2g0218 316 Gene3D Mitochondrial carrier domain 111 305 IPR023395 -
Lan2g0218 316 Gene3D Mitochondrial carrier domain 2 110 IPR023395 -
Lan2g0218 316 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 6 314 IPR044712 GO:0006862|GO:0055085
Lan2g0218 316 Pfam Mitochondrial carrier protein 114 205 IPR018108 -
Lan2g0218 316 Pfam Mitochondrial carrier protein 220 304 IPR018108 -
Lan2g0218 316 Pfam Mitochondrial carrier protein 16 107 IPR018108 -
Lan2g0218 316 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 6 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0218 Lan-Chr2 1808741 1813641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0218 9 316 Chloroplast and Mitochondria Gene Families AT2G47490 75.649 2.49e-159 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0218 K15115 - gmx:100500213 520.005