Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0193 ATGTTCCACTTTCGTAAACTTAGATTAACGTTCACATTTCCCATTTTCAATTTTTCCCCAAAAACCCACCTTAAACCCTCGCAAAACCCTAGATTTCTTCAAACTACGAAAAAATCACCAATTCTTCAACCCGAAAAGAAATTCACCCCAACAACTATCAGAGAAGCGCAATCTGCATTGCTTGAGTACTTGCATTCCACAAGAAGTTTGCAATTTACCGATGCAGATAACATGTGCAAAAATTCCCCTTTTTTCATTCAGGATCTTCTAAGCAAAGTTAAAATCCGAAAGGATAGTGTATCAGATATGAAGAAATCCATTTCAAGGTACCTATGTTATCACCCAATTAATGAATTTGAACCCTTTTTCGAAAGCATGGGTTTGAGGCCTTCGGAATATGTGTGTCTTCTTCCGAAAGACATGATTTTTCTTAACGATGATGTGGTTTTGATGGAGAATTATCATACTTTGTGTAACTATGGTGTTCCACGGAACAGAATGGGGAGGATTTTTAAGGAAGCTCCGCAGTTGTTTCGTTATGAACAAGGGGTTTTGTCGAAGAAGATTCAGGCTTATGAAAACCTTGGGGTTGCGCCGTCGACGTTAGTGAAAATTGTTACTTTGAGTCCTTGTCTTTTGGTTGGGGGTGTTAATGTTCAGTTTGTTAAGGTTGTGGAGAAGTTGAAGGGTCTTGTTGCGAAGGGTGGTAGCGATTGGATCGAGCGGCATTTGTTGGATTGTAATTGGGGTTTGATGCTTGAGCTATTGTGCTTGCTTGGCAAGGTTTGTAGTGAGGAACAGTTGGGCGACATCATTCACAATCACCCTTGTGTTGTGGAATCGGGTGGTACGACGCTGTCATTGATTGGGTTCTTGTTGAAATTTGGTTTGTCTGTGAACCAGATATGTCTTGTGTTTCTCGAGTTTCCAGAGATTCGGGTTGATCAGTTTTTGAAAAACTTGAGACAGTGTTTTTTGTTCTTTAATGAAATTGAGATGGAGGCTGCAGAGATTGGAAAGATTTTCCAGTTCCATTCTTTAATGCTGGGTTCTTCCACATTAAAGAAAACAAATAGTTTACTTTGTAATTTGAATGTTGGTAAGAAGCGATTATGCAGATTCGTAGAGGAGAACCCTCAAGAAATCAGGAATTGGGCTGTTGGAAGGAAAGTTCAGCCTCTTGAGAACACAAATGAAGATCAAATATCGAAGGAGCACAAGATAGAGTTCTTGCTGGGGTTAGGATATGTAGAAAACTCGGAAGAAATGAAAAAGGCGTTTAAGCTGTTCAGAGGGAGGGGAACAGAGCTTCAGGAGAGATTTGATTTTATTGTTGAAGCTGGCTTGGATTATAAGGTTGTCCGAGATATGATTGTAGTTTACCCTCAAATTCTTAATCAGAGCACAGATAGGATCAACTTTAAAATTGAGCTACTTGTCAAGGAAGGATATCCTATATCAAGCTTAGTGAACTTCCCATCTTTTCTTTCCTATACACCAGGAAGAGTTAAGCTTAGGTTATCAATGTATAATTGGCTCAAGGACCATGGAGCTGCAGATCCCGGGCTTAGTTTGAGCACGGTGATCGCATGCTCTGACAAAGTATTCGTAAAGCAGTATGTAAATCGGCATCCATCTGGCCCTCGAGCTTGGCAGGATTTAAATGCACAAATTCATTTTGAATAA 1686 0.3992 MFHFRKLRLTFTFPIFNFSPKTHLKPSQNPRFLQTTKKSPILQPEKKFTPTTIREAQSALLEYLHSTRSLQFTDADNMCKNSPFFIQDLLSKVKIRKDSVSDMKKSISRYLCYHPINEFEPFFESMGLRPSEYVCLLPKDMIFLNDDVVLMENYHTLCNYGVPRNRMGRIFKEAPQLFRYEQGVLSKKIQAYENLGVAPSTLVKIVTLSPCLLVGGVNVQFVKVVEKLKGLVAKGGSDWIERHLLDCNWGLMLELLCLLGKVCSEEQLGDIIHNHPCVVESGGTTLSLIGFLLKFGLSVNQICLVFLEFPEIRVDQFLKNLRQCFLFFNEIEMEAAEIGKIFQFHSLMLGSSTLKKTNSLLCNLNVGKKRLCRFVEENPQEIRNWAVGRKVQPLENTNEDQISKEHKIEFLLGLGYVENSEEMKKAFKLFRGRGTELQERFDFIVEAGLDYKVVRDMIVVYPQILNQSTDRINFKIELLVKEGYPISSLVNFPSFLSYTPGRVKLRLSMYNWLKDHGAADPGLSLSTVIACSDKVFVKQYVNRHPSGPRAWQDLNAQIHFE* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0193 561 Pfam mTERF 407 536 IPR003690 GO:0003690|GO:0006355
Lan2g0193 561 Pfam mTERF 263 416 IPR003690 GO:0003690|GO:0006355
Lan2g0193 561 Gene3D Transcription termination factor 3, mitochondrial 286 552 IPR038538 -
Lan2g0193 561 Gene3D Transcription termination factor 3, mitochondrial 85 285 IPR038538 -
Lan2g0193 561 PANTHER MITOCHODRIAL TRANSCRIPTION TERMINATION FACTOR-RELATED 45 555 - -
Lan2g0193 561 PANTHER CGI-12 PROTEIN-RELATED 45 555 IPR003690 GO:0003690|GO:0006355
Lan2g0193 561 SMART mt_12 455 485 IPR003690 GO:0003690|GO:0006355
Lan2g0193 561 SMART mt_12 420 450 IPR003690 GO:0003690|GO:0006355
Lan2g0193 561 SMART mt_12 486 519 IPR003690 GO:0003690|GO:0006355
Lan2g0193 561 SMART mt_12 269 298 IPR003690 GO:0003690|GO:0006355
Lan2g0193 561 SMART mt_12 203 234 IPR003690 GO:0003690|GO:0006355
Lan2g0193 561 SMART mt_12 168 198 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0193 Lan-Chr2 1625656 1628185 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan2g0193 mTERF 6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0193 - - lja:Lj1g3v4317450.1 672.159