Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0180 ATGTCTTTTGTTCTTAGAAAAGCATGGGAACTCTTCTTCACTTCAACTACTCCAACCCCATTATCATCATCCATATCAAACTTCAATTATTCCAAAGACTTATCTGAATTATCTTATTCTGCTTTTTCTTCAGATATAGGTCACTTGGAGAAGCTTCCATTTGATATATTGATGCAAATTTTGAAGCTTTTGGGTCCTAAAGAAGTAGCAAAGTTAAGCATAATTTGCAAGTCTTTGAGATATTTGGTCAAAGATAATCGTCTTTGGGTTCATTTCCTTCAGATTCATCAATCTCATCCATCATGGGATTCTCTCTTCTTTGCTGAAACCACCTTGATCTATGGCTTCCCTTTACCATCCCTCATTGGCCAGAGGCCCCAGCTTTCATTCATGCAGATTTATGGCCAACGAGAACAAGTTCCTGGTGCTATTATCATCGATGGCGGTTCTGGGTATTGCAAATTTGGTTGGAGCAAATACGAGTGTCCATCGGGGCGATCAGCAACCTTTTTGGAATTTGGTAACATCGAGACGCCAATGTACACTAGACTTCGACATTTTTTTGCAACTATTTATAACAGGATGCAGGTGAAGCCAAATACACAACCCGTTATTGTTTCTACACCATTATGCCATTATGAGGATACTGAAGCAGCCAAAGCATCAAGACGGCAGCTTAAAGACGCAATTTATTCTGCTTTGTTTGACATGAATGTTCCTGCTGTTTGTGCTGTCAATCAGGCAACTCTAGCTCTGTATGCTGCGAAACGAACTTCTGGAATAGTTGTTAATATAGGCTTTCAAGTGACATCTGTAGTTCCAATACTAAATGGTAAAGTGATGCGCAAGTTTGGTGTAGAAGTTATGAGACTGGGATCACTCAAACTTACAGGATTTATTAGGGAGAAGATGGAGCTAAACAACATAAGATTTGAATCCTTGTACACTGTTCGCACGTTGAAAGAGAATCTTTGCTATGTTGCTCTTGACTATGAAGCCGAGCTATTAAAAGATACACAAGCATCATTTGAAGCAACAGGAGAAGGGTGGTTTACACTTTCCAAAGAGAGGTTTCAAACAGGAGAGATCTTATTTCAGCCACATCTTGCTGGAGTGCAAGCCACGGGTTTACACCAGACCATAGCTCGTTGTATGAACCGTTGCCATTCCGCAGAATTAGCTGGCGACAATGACTGGTACAAGACCATAGTTCTGTGTGGGGGCACTGCATGTTTACCAGGTTTGACAGAGCGGTTAGAGAAGGAACTCCGTGCCTTGCTTCCTCCGTATATGTCGAATGGAATTAGAGTCATACCTCCTCCATATGGTGCTGATACTCCATGGTTTGGAGCAAAGATTATAGGCAATGTGAGTACCTTTCCCGGTCGTGGGTGTGTCGCAAAAAAGAAGTTCCCTCAGAAGTCTACTAGATTCAACCTTTTGTGGTGA 1449 0.4148 MSFVLRKAWELFFTSTTPTPLSSSISNFNYSKDLSELSYSAFSSDIGHLEKLPFDILMQILKLLGPKEVAKLSIICKSLRYLVKDNRLWVHFLQIHQSHPSWDSLFFAETTLIYGFPLPSLIGQRPQLSFMQIYGQREQVPGAIIIDGGSGYCKFGWSKYECPSGRSATFLEFGNIETPMYTRLRHFFATIYNRMQVKPNTQPVIVSTPLCHYEDTEAAKASRRQLKDAIYSALFDMNVPAVCAVNQATLALYAAKRTSGIVVNIGFQVTSVVPILNGKVMRKFGVEVMRLGSLKLTGFIREKMELNNIRFESLYTVRTLKENLCYVALDYEAELLKDTQASFEATGEGWFTLSKERFQTGEILFQPHLAGVQATGLHQTIARCMNRCHSAELAGDNDWYKTIVLCGGTACLPGLTERLEKELRALLPPYMSNGIRVIPPPYGADTPWFGAKIIGNVSTFPGRGCVAKKKFPQKSTRFNLLW* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0180 482 PANTHER MACRONUCLEAR ACTIN 94 471 - -
Lan2g0180 482 Gene3D - 144 471 - -
Lan2g0180 482 Gene3D Actin; Chain A, domain 4 291 374 - -
Lan2g0180 482 ProSiteProfiles F-box domain profile. 46 92 IPR001810 GO:0005515
Lan2g0180 482 PANTHER ACTIN 94 471 IPR004000 -
Lan2g0180 482 Gene3D - 34 114 - -
Lan2g0180 482 SUPERFAMILY F-box domain 44 104 IPR036047 GO:0005515
Lan2g0180 482 SUPERFAMILY Actin-like ATPase domain 257 462 IPR043129 -
Lan2g0180 482 Gene3D - 248 446 - -
Lan2g0180 482 Pfam Actin 190 470 IPR004000 -
Lan2g0180 482 CDD NBD_sugar-kinase_HSP70_actin 144 289 - -
Lan2g0180 482 Pfam F-box domain 51 90 IPR001810 GO:0005515
Lan2g0180 482 SUPERFAMILY Actin-like ATPase domain 142 263 IPR043129 -
Lan2g0180 482 SMART fbox_2 52 92 IPR001810 GO:0005515
Lan2g0180 482 SMART actin_3 141 481 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0180 Lan-Chr2 1512294 1519307 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0180 190 460 Cytoskeleton Gene Families AT3G12110 33.929 4.13e-40 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0180 K16616 - gmx:100791973 749.199