Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0177 ATGGCTGGGATTGATGATAATGTTGCGGTAGCCGCCGATTGGGGTCTTCCAAATCCGAACCCGAGAATCCATTTTTCTAGAATGCTAGGTGGAGATAATGTAACAAGATCAATCTCAGATCCTGCTGGAAATGGTAGAACAGAGTTTGTCTTTCCAGGGAGTCATGAACAGGCTGAGACAGGGAAAGGAGACATAAATGATAGCTCACAAGATGGTGATTCTGGTGACCAATTGACCGACTCGAGCTTTATAGCCGATCAGAAATCAAACTCACGAGGAGCTCTTATGGAAAGAATGGCTGCTAGAACTGGGTTTAATGCTCCGAGGTTGAATACAGAAAGCTTTAGATCTACTGATCTGACACTTAGTACTGATATTCAATCTCCATACTTGACCATACCGCCGGGTCTCAGTCCCACCACACTTTTGGATTCTCCGGTGTTCCTTGCAAATGCGCTGGCACAGCCATCTCCAACAACTGGAAAGTTTCCGTTCATCTCCAATGGCAACATTCGGTACTCAGAGTTATCATCTGATGCTCCTGAAAAATATAAACAAAACCTTGATGATTTCTATGCATCATCTTTTGCTTTCAAGCTTGCAACCGATTCGAGCTCATCTTTTTATTATGGTGCTGAAAGGAAAGTAAATCCAACTGCAGTTCCTCAACAATCTGTTCCTGGTTTTGAGGCCTCTGTTCAGTCAGAAAATTCTTTCCAATCTCAAAGTGTTGATGATATCAAGATTCAAACTGAGAACGGAAGTGGCTCCCATCATCAGCCAGACTTTATCGAGTCGCCTCCTCAAGATGATAACGGATTTAAATCTTTATCAGGTGATCGAAGGGCATCTGATACTGTTGGTGGTATCGTCGAGCGTTCCACACCACCTGAAGAGCAAGCAGATGAAGAGGGAGATCAAAGAGGGAATGGAGACTCGGTGGTTGCTGATGTTGGTGGTACACCGTCTGAAGATGGATATAACTGGAGAAAATATGGCCAAAAGCAAGTAAAGGGAAGCGAGTATCCACGAAGTTACTATAAGTGTACACATACAAATTGTCTGGTTAAGAAGAAAGTGGAACGATCTCACGAGGGCCACATAACAGAGATTATCTATAAGGGAGCGCACAACCATCCCAAACCGCCTTCAAATCGTCGGTCCAGCATAGGGTTAGTCATCCCTAATACTGACATGCAAGTGGACAATTCTGAACATGTTGGACCACATAATGGTGGTAATGGTGACCTGGGCTGGGTTAATGTACAAAAGGGAGTTATAGCTGGAGCGGCTAACTGGAAGCATGACAACCCTGAAGTGACATCATCGGCATCTGTCGGCCCTGAATACGGCAACCAGTATACCAATTTCCAGAATCAGAATGGTACTCACATTGATTCAGGAGATGCAGTGGATGCCTCTTCTACTTTTTCTAATGAAGATGAAGATGACCGAGGCACTCATGGTAGTGTCTCGTTAGGTTGTGATGGGGAAGGAGATGAATCTGAATCTAAAAGAAGGAAACTGGAATCTTACGCAACAGAGATGAGTGGAGCTACAAGAGCTATCCGTGAGCCTAGAGTTGTTGTACAGACTACCAGTGAAGTAGATATCCTCGATGATGGCTACCGATGGCGAAAGTATGGGCAAAAAGTTGTTAAAGGAAATCCAAATCCAAGGAGTTATTATAAGTGCACCAGCACTGGCTGCACGGTGAGGAAGCATGTCGAGAGAGCATCGCATGACCTTAAATCTGTGATCACTACTTACGAGGGAAAGCACAATCACGATGTCCCTGCTGCTCGTGCTAGCAGTCATGTCAACGCTACCTCATCTAGTGCTGTTCCTGGGCAAGGTCATGTTCATAGACCTGAACCATCTCAAGTTCACAATGGCATTGGAAGGCTCGAAAGGCCTTCCCTGGGATCATTCAACCTACATGGTAGGCAACAGCTAGGATCTTCCCATGGCTTCTCCTTTGGTATGAATCATCAACCTATGCTCTCGAATCTGTCAATGCCAGGATTCGGAACTGGGCAAGGAAAGCTTCCTGCCATGCCGGTCCATCCATTCTTGGCTCAACAACGCCCGACAAGTTTTATGTTACCGAAGGGAGAATCAAATGTGGAACCTATTCCTGAACGTGGCTCGTCACTCTATCAAGAAATCATGAATTGCATGCCTCTTGGACCTCATATGTAA 2202 0.4519 MAGIDDNVAVAADWGLPNPNPRIHFSRMLGGDNVTRSISDPAGNGRTEFVFPGSHEQAETGKGDINDSSQDGDSGDQLTDSSFIADQKSNSRGALMERMAARTGFNAPRLNTESFRSTDLTLSTDIQSPYLTIPPGLSPTTLLDSPVFLANALAQPSPTTGKFPFISNGNIRYSELSSDAPEKYKQNLDDFYASSFAFKLATDSSSSFYYGAERKVNPTAVPQQSVPGFEASVQSENSFQSQSVDDIKIQTENGSGSHHQPDFIESPPQDDNGFKSLSGDRRASDTVGGIVERSTPPEEQADEEGDQRGNGDSVVADVGGTPSEDGYNWRKYGQKQVKGSEYPRSYYKCTHTNCLVKKKVERSHEGHITEIIYKGAHNHPKPPSNRRSSIGLVIPNTDMQVDNSEHVGPHNGGNGDLGWVNVQKGVIAGAANWKHDNPEVTSSASVGPEYGNQYTNFQNQNGTHIDSGDAVDASSTFSNEDEDDRGTHGSVSLGCDGEGDESESKRRKLESYATEMSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSTGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARASSHVNATSSSAVPGQGHVHRPEPSQVHNGIGRLERPSLGSFNLHGRQQLGSSHGFSFGMNHQPMLSNLSMPGFGTGQGKLPAMPVHPFLAQQRPTSFMLPKGESNVEPIPERGSSLYQEIMNCMPLGPHM* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0177 733 MobiDBLite consensus disorder prediction 437 514 - -
Lan2g0177 733 Gene3D WRKY domain 526 592 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan2g0177 733 MobiDBLite consensus disorder prediction 498 512 - -
Lan2g0177 733 MobiDBLite consensus disorder prediction 607 630 - -
Lan2g0177 733 MobiDBLite consensus disorder prediction 63 89 - -
Lan2g0177 733 MobiDBLite consensus disorder prediction 437 475 - -
Lan2g0177 733 MobiDBLite consensus disorder prediction 251 329 - -
Lan2g0177 733 SMART WRKY_cls 539 598 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g0177 733 SMART WRKY_cls 323 381 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g0177 733 MobiDBLite consensus disorder prediction 296 310 - -
Lan2g0177 733 SUPERFAMILY WRKY DNA-binding domain 321 382 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan2g0177 733 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 73 616 - -
Lan2g0177 733 ProSiteProfiles WRKY domain profile. 324 382 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g0177 733 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 73 616 IPR044810 GO:0003700
Lan2g0177 733 ProSiteProfiles WRKY domain profile. 534 599 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g0177 733 Pfam WRKY DNA -binding domain 540 596 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g0177 733 Pfam WRKY DNA -binding domain 324 380 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan2g0177 733 SUPERFAMILY WRKY DNA-binding domain 531 599 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan2g0177 733 MobiDBLite consensus disorder prediction 56 91 - -
Lan2g0177 733 Gene3D WRKY domain 312 383 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0177 Lan-Chr2 1489780 1494286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0177 1 728 WRKY Transcription Factor Family AT5G56270 47.837 1.08e-180 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan2g0177 WRKY 3.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0177 K18835 - gmx:100796545 1109.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g1096 4 16481020 16485635 Lan2g0177 2 1489780 1494286 LSH
Lan2g0177 2 1489780 1494286 Lan16g0779 16 13675387 13680281 LSH