Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0173 TCGTCTGAAAGTGATCGTAAACAACGAGACGATTCGATAGATTTGTTGGACAAGGATTTGTGCATTTGTTGCAATCAAGGTGGGGAAGTGTTGGTTTGTAGTGAAAAGGGTTGTCCTGTTACTCTCCATGTAAACTGTTTCGAATCTGAACCTAAATTCGACGATTCGGGTAACTTCTACTGCCCTTATTGTTGGTACAAGCGAGCGGTGGACAAGTGTCAAGAGTTGAGGGAAAAAGCCATGACAGCGAAGAAAGCTTTGTCAAACTTTTTGGATAAAAATGGGGGTTCTAAGAGGAAAGCGGCTGTTGTGGGAGATGGTGATAATATGCATGATGGTACTGATGGTGTTCACGGTCAGAATTTACAGGCTGAGATAAATCAACAAAGGAAATTGCATAATTCAGATATCGATCAAGCCGATGCTAATGATGATGTTGGACCTTGTAGAGAAGAAGAAATGCCTATACATATTAAGGCGGTTCAGGATTCAATGAACTTGGAGAAATTTGACAAACCTGACACTTCTGAAACACGTGAAACCAGAAATGTGGAACAGAAAGAAACCAAGGATTCAAGACATAATATGGAGGATGAATGTGAAAGAATTGTTGAGGCTGGAGAGGAAGTAGAACCTATGGGTGCTTCCCGATTGGGAACGGATGCTGGTGTACAATCACAAAATATTGCATGTGATAACGGGGCTGAAGAAAGTATTGCACATCCTGCAGAGAATAAGGGAAAACTGCCACAGGTAGAACAAAAGGTATCTTCAACTGGTAGTTCTATGAGTGAAGCTAATGATTCGGAGTTTGAGGCGATCTCATTGAAGAAGAGATGTGCCAAACGGAAGGTTCAAGAGACAGCATATCCTCAGAAGGTTGCTCCTGCCAAGAAATCATTATTGCATGAGCATAACACTGCAGACAAAAATGCTAGTGACGTAAACGAGGAAGTGACCAGCTCCAGAACTTTAAGACAACAACAGAAGTCACCTAGCTATGTTTGCAGCAGGAATCAGCCTTTTCTGGCTGGAAGGCGTAAGAAATTACGTTGGACAGTTGAAGAAGAAACAGCTCTGAAGGAGGGAGTTTCAAAGTTCTCAACAGAAAATGGGAAAATCCCCTGGAGGAGAATCTTAGAATTTGGTACTCGTGTATTTGATAAGACTCGTACTCCTGTTGATCTGAAGGATAAATGGAGGAACATTACTGCCAAGGAAGGGCCTTTTGTAGCCAGCTTTCAGGGATACATATATGATAGAATTCTTACAACGAGTATTCTGGCAAATTATTTTCATCTCTACTTAATAGTTGTTATTTCAATTTTCTCTCAGCTACATTATTCCTAA 1350 0.4104 SSESDRKQRDDSIDLLDKDLCICCNQGGEVLVCSEKGCPVTLHVNCFESEPKFDDSGNFYCPYCWYKRAVDKCQELREKAMTAKKALSNFLDKNGGSKRKAAVVGDGDNMHDGTDGVHGQNLQAEINQQRKLHNSDIDQADANDDVGPCREEEMPIHIKAVQDSMNLEKFDKPDTSETRETRNVEQKETKDSRHNMEDECERIVEAGEEVEPMGASRLGTDAGVQSQNIACDNGAEESIAHPAENKGKLPQVEQKVSSTGSSMSEANDSEFEAISLKKRCAKRKVQETAYPQKVAPAKKSLLHEHNTADKNASDVNEEVTSSRTLRQQQKSPSYVCSRNQPFLAGRRKKLRWTVEEETALKEGVSKFSTENGKIPWRRILEFGTRVFDKTRTPVDLKDKWRNITAKEGPFVASFQGYIYDRILTTSILANYFHLYLIVVISIFSQLHYS* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0173 449 MobiDBLite consensus disorder prediction 298 312 - -
Lan2g0173 449 MobiDBLite consensus disorder prediction 167 197 - -
Lan2g0173 449 MobiDBLite consensus disorder prediction 287 331 - -
Lan2g0173 449 ProSiteProfiles Myb-like domain profile. 344 404 IPR001005 -
Lan2g0173 449 PANTHER RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN 7 409 - -
Lan2g0173 449 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 102 IPR013083 -
Lan2g0173 449 CDD SANT_TRF 351 404 - -
Lan2g0173 449 ProSitePatterns Zinc finger PHD-type signature. 21 64 IPR019786 -
Lan2g0173 449 MobiDBLite consensus disorder prediction 313 331 - -
Lan2g0173 449 Pfam Myb-like DNA-binding domain 350 403 IPR001005 -
Lan2g0173 449 Gene3D - 352 423 - -
Lan2g0173 449 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 7 409 - -
Lan2g0173 449 Coils Coil 66 93 - -
Lan2g0173 449 SUPERFAMILY Homeodomain-like 346 405 IPR009057 -
Lan2g0173 449 SMART sant 348 406 IPR001005 -
Lan2g0173 449 SUPERFAMILY FYVE/PHD zinc finger 16 68 IPR011011 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0173 349 405 Single Myb Histone (SMH) Gene Family AT3G49850 56.667 1.06e-08 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lan2g0173 Myb_DNA-binding 9.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0173 - - lang:109325681 915.605