Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0170 ATGTATAGAATAATATCCACGCCGGCTTCTAAGTTCCGCGAACTCCGGCGAGTCCACTCAAAAAAAACTACTGCAGCTACCGACGTGGAACACGCCCACCATATACTATGGCGATACCAGATCCTAGACCCGGACAGCGACATTGTTACGTATTGGAACAAGGTTTTTCTTGTTACGAGCCTTCTTGCGCTCTTTGTCGATCCTCTCTACTTTTTTCTTCCAACTGTTGGTGGTCCTGCGTGCATGAAAGCGGATCATAAACTTCGTATATTGATCACTGTTCTTCGTTCATTTGCTGATCTTTTTTATGTTCTTCATATGGTCATGAAGTTTCGTACTGCTTTTGTTGCGCCAAATTCTAGAATTGTTGGTCGTGGTGAACTTGTTATGGATCCTCGTCAAATTGCTATGCGTTACTTGAAGTCTGATTTTGTTATTGATCTTGCAGCTACTATTCCATTACCACAGATTGTGATTTGGTTAGTGATTCCAGGGAGCACAAACGCAAGATCATCTAATCATGCCAACACTACTCTTGCACTTTTTGTTCTTATTCAATATGTTCCTAGACTTTTTCTTATCTTCCCATTGAACCAGCGTATCCAGAAAACCACCGGTGTCATCGCCAAGACTCCTTGGATTGGAGCCGCTTATAATCTAGTTCTCTACATGTTAGCTAGTCATGTTACAGGAGCAACTTGGTATCTATCATCAATAGGGAGACAATTTAGCTGCTGGAAAACACAGTGCGAGCTTGAAGATAAATCACATGCTCTGTCTTGCTTACCTAGTTTTCTTGATTGTAGTAGTGTGGAACTTCCTGAAAGACAATACTGGCTAAATATAACTCGTGTGATTAGCAAATGTGATGCAAAGAGCAAGATCAACATCAAATATAAGTTTGGTATGTTTGCAGATGCATTCTTAAATGATGTTGTCACTACAAGTTTTAAGGAAAGATACTTCTATTGTCTTTGGTGGGGCTTACGAAATTTAAGTTCATATGGACAGAATTTGGACACCACCACATACCTTCTGGAGACACTATTTTGCATCGTATTATGCATTGCTGGGTTAATTCTCTTTTCACTTTTGATTGGAAACATGCAGACATATTTGCAATCAATGTCAGTTAGACTTGAAGAATGGAGAATTCGTAAAAATGACACAGAGGAATGGATGAGGCATCGTCAGTTACCAACAGATTTGCAAGAACGTGTTCGTCGGTTTGTGCAGTATAAATGGTTAGCAACTAGAGGAGTTAATGAAGAGTCCATTCTTCTTTCATTACCTATGGATCTTCGTCGTGAAATTCAACATCATTTGTGTCTATCTCTTGTTCGCCGTGTTCCTTTTTTCTCACAAATGGATGATCAACTTCTTGATGCAATTTGTGAACGCCTTGCATCATCACTAAGTACAGCAGACACGTACATTTTTCGAGAGGGTGACCCAGTTGATGAAATGCTATTCATTATCAGAGGCCAATTAGAGAGTTCCACAACCAATGGAGGAAGATCTGGTTTCTTCAATTCCATCACACTAAGACCTGGTGATTTCTGTGGAGAAGAATTATTAACATGGGCCTTAATGCCAAACTCCACCCTCAACTTACCTTCTTCAACTCGAACAATCAAAGCTATTTCTGAAGTTGAAGCTTTTGCACTACAAGCAGAAGATCTCAAATTTGTAGCAAGTCAATTCAAGCGCCTTCATAGCAAGAAGCTTCAACATGCATTTAGATACTATTCTCATCAATGGAGGACATGGGGTTCTTGTTTTATACAAGCTGCATGGAGAAGGTATAAGAAAAGGAAAGCAACAAGGGAGTTATCCATGAAAGAGAGTTACTATTACATGGAAATGAATGAGACAGAGAGTGATTATATGGAAAGGGATGATAGTGAAATCTATGAAGGTGGTGAGATTGGAAGATCTTCAGGGAATGTGAAAAAGGTTCAGAATTTTGGTGCAACTGTTTTGGCTTCAAAGTTTGCAGCAAATACAAAGAAAGGGAATCATAAGATTCCAGATAGGGACCCTGTACCACAATTGTTTAAGCCAGATGAACCTGATTTCTCTATGGATCATGAGGAAGTTTAG 2103 0.3961 MYRIISTPASKFRELRRVHSKKTTAATDVEHAHHILWRYQILDPDSDIVTYWNKVFLVTSLLALFVDPLYFFLPTVGGPACMKADHKLRILITVLRSFADLFYVLHMVMKFRTAFVAPNSRIVGRGELVMDPRQIAMRYLKSDFVIDLAATIPLPQIVIWLVIPGSTNARSSNHANTTLALFVLIQYVPRLFLIFPLNQRIQKTTGVIAKTPWIGAAYNLVLYMLASHVTGATWYLSSIGRQFSCWKTQCELEDKSHALSCLPSFLDCSSVELPERQYWLNITRVISKCDAKSKINIKYKFGMFADAFLNDVVTTSFKERYFYCLWWGLRNLSSYGQNLDTTTYLLETLFCIVLCIAGLILFSLLIGNMQTYLQSMSVRLEEWRIRKNDTEEWMRHRQLPTDLQERVRRFVQYKWLATRGVNEESILLSLPMDLRREIQHHLCLSLVRRVPFFSQMDDQLLDAICERLASSLSTADTYIFREGDPVDEMLFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALMPNSTLNLPSSTRTIKAISEVEAFALQAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWGSCFIQAAWRRYKKRKATRELSMKESYYYMEMNETESDYMERDDSEIYEGGEIGRSSGNVKKVQNFGATVLASKFAANTKKGNHKIPDRDPVPQLFKPDEPDFSMDHEEV* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0170 700 Gene3D Jelly Rolls 450 570 IPR014710 -
Lan2g0170 700 Gene3D - 57 377 - -
Lan2g0170 700 CDD CAP_ED 452 583 IPR000595 -
Lan2g0170 700 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 30 696 - -
Lan2g0170 700 SUPERFAMILY cAMP-binding domain-like 382 577 IPR018490 -
Lan2g0170 700 Pfam Cyclic nucleotide-binding domain 475 563 IPR000595 -
Lan2g0170 700 Gene3D Helix hairpin bin 379 443 - -
Lan2g0170 700 MobiDBLite consensus disorder prediction 669 700 - -
Lan2g0170 700 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 30 696 - -
Lan2g0170 700 ProSiteProfiles cAMP/cGMP binding motif profile. 452 582 IPR000595 -
Lan2g0170 700 Pfam Ion transport protein 50 379 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lan2g0170 700 SUPERFAMILY Voltage-gated potassium channels 43 374 - -
Lan2g0170 700 MobiDBLite consensus disorder prediction 671 700 - -
Lan2g0170 700 SMART cnmp_10 452 583 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0170 Lan-Chr2 1441260 1445273 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0170 10 700 Ion Channels AT5G14870 67.465 0.0 1003
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0170 K05391 - gmx:100802812 1221.84