Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0162 ATGTCAATTTACGATGCACCTTTCATAGACTCACAGCTCTCTAAACGCACCTCCATCTTCGGCCTCCGTCTCTGGGTTGTCATCGGTATCCTCCTCGGCTCCTTCATCGTCCTCTTCCTCTTCTTCCTCTCCCTCTGCCTCACCTCCCGCCGCCACCGCCACCGCCACCGCACCACCACCAAAAACAACGCCAAGCCCCAAACCATCCCAGTCATCTCAAAGGAAATCCAAGAGATCGTCCACGTGGCACCCCGCCTCGAGATCCACGTGGACGCGGCGAAGGCGAGCGGGGAGAGCGTGTGTGAAACGACGTCGTCGTTTGGGAGTGGGAGCGTGGGGCCCGAAGTGTCGCATCTTGGGTGGGGAAGGTGGTATACGTTGAGAGAGCTTGAAGCTGCAACTGATGGATTGTGTGATGAGAATGTGATTGGTGAAGGTGGTTATGGAATTGTGTATCGTGGTGTTCTACCTGATGGGACTAAACTTGCTGTTAAGAATCTCTTAAATAACAAGGGCCAAGCTGAGAGGGAATTTAAAGTAGAGGTAGAAGTAATTGGTCGTGTGCGGCACAAGAATCTTGTTAGGTTGCTTGGGTACTGTGTTGAGGGGGCATACAGGATGCTTGTGTATGAATATGTTGACAATGGCAATCTTGAACAGTGGCTGCATGGGGATGTTGGATCCATAAGCCCTCTGACATGGGATATCCGCATGAACATTATATTGTGCACAGCAAAAGGATTGGCTTATCTTCACGAGGGTCTTGAACCAAAAGTTGTCCACCGAGATGTGAAATCAAGCAACATACTCCTTGATCGACAATGGAACTCAAAGGTTTCTGATTTTGGGCTTGCTAAGCTTTTGTGTTCTGAGCATAGTTATGTCACAACTCGGGTGATGGGGACATTTGGTTATGTTGCACCTGAGTATGCCTGCACTGGAATGCTGACTGAGAAGAGTGATGTTTATAGCTTCGGGATACTTATCATGGAAATAATTACTGGTAGAAGTCCTGTTGATTATGGCAGACCACATGGAGAGGTTAATTTAATAGAGTGGTTGAAAAATATGGTTGGGAATCGTAAAGCTGAGGAAGTAGTTGATCCTAAGTTCCCTGAGAAGCCATCTCCAAAGGCTCTTAAACGGGCTCTGTTGGTTGCTCTTCGATGTGTTGATCCTGATGCGACAAAGAGACCTAAAATGGGACATGTGATCCACATGCTTGAGGCGGACGACCTCTTATTCCGTGATGAACGAAGAGTCGGGGGAGAGTCTTCCCGATCCCACGGTGATCATCAACAAGAGCATAAGGACTCAAGTTTAGATAAAAAATCGATAGGTGGAGACATCACTGATCAAAGTGAAGACGATAGTACTAGAAATCACAAACAGCCCACCAGGTCAAGGTCATAG 1413 0.4791 MSIYDAPFIDSQLSKRTSIFGLRLWVVIGILLGSFIVLFLFFLSLCLTSRRHRHRHRTTTKNNAKPQTIPVISKEIQEIVHVAPRLEIHVDAAKASGESVCETTSSFGSGSVGPEVSHLGWGRWYTLRELEAATDGLCDENVIGEGGYGIVYRGVLPDGTKLAVKNLLNNKGQAEREFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGSISPLTWDIRMNIILCTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNSKVSDFGLAKLLCSEHSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYGRPHGEVNLIEWLKNMVGNRKAEEVVDPKFPEKPSPKALKRALLVALRCVDPDATKRPKMGHVIHMLEADDLLFRDERRVGGESSRSHGDHQQEHKDSSLDKKSIGGDITDQSEDDSTRNHKQPTRSRS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0162 470 MobiDBLite consensus disorder prediction 420 464 - -
Lan2g0162 470 Pfam Protein kinase domain 140 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0162 470 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 92 460 - -
Lan2g0162 470 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1 83 - -
Lan2g0162 470 ProSiteProfiles Protein kinase domain profile. 137 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0162 470 SUPERFAMILY Protein kinase-like (PK-like) 115 409 IPR011009 -
Lan2g0162 470 MobiDBLite consensus disorder prediction 420 470 - -
Lan2g0162 470 Gene3D Transferase(Phosphotransferase) domain 1 213 420 - -
Lan2g0162 470 ProSitePatterns Protein kinases ATP-binding region signature. 143 165 IPR017441 GO:0005524
Lan2g0162 470 SMART serkin_6 137 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan2g0162 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Lan2g0162 470 PANTHER OS01G0323000 PROTEIN 1 83 - -
Lan2g0162 470 PANTHER OS01G0323000 PROTEIN 92 460 - -
Lan2g0162 470 Gene3D Phosphorylase Kinase; domain 1 118 212 - -
Lan2g0162 470 CDD STKc_IRAK 143 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0162 Lan-Chr2 1371589 1374605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0162 26 409 Trihelix Transcription Factor Family AT5G38560 40.513 1.97e-92 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lan2g0162 Pkinase 1.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0162 - - gmx:100777348 704.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0715 9 11077931 11082020 Lan2g0162 2 1371589 1374605 LSH
Lan2g0162 2 1371589 1374605 Lan9g0715 9 11077931 11082020 PCT
Lan2g0162 2 1371589 1374605 Lan2g0162 2 1371589 1374605 PCT
Lan9g0715 9 11077931 11082020 Lan2g0162 2 1371589 1374605 PCT